RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
SDCBP-212ENST00000523483 WTIPA6NIX2 430 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-212ENST00000523483 ATP2B3Q16720 1220 aa11.45□□□□□ -0.58
SDCBP-212ENST00000523483 C2CD5Q86YS7 1000 aa11.45□□□□□ -0.58
SDCBP-212ENST00000523483 DNAJC2Q99543 621 aaKnown RBP11.45□□□□□ -0.58
SDCBP-212ENST00000523483 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
SDCBP-212ENST00000523483 CHRNDQ07001 517 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-212ENST00000523483 BRIP1Q9BX63 1249 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 H0YIN7 160 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 ADORA1P30542 326 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 PDE6BP35913 854 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 OLFM4Q6UX06 510 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 RBM17Q96I25 401 aaKnown RBP11.44□□□□□ -0.58
SDCBP-212ENST00000523483 DBNLQ9UJU6 430 aaKnown RBP11.44□□□□□ -0.58
SDCBP-212ENST00000523483 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
SDCBP-212ENST00000523483 TMX4Q9H1E5 349 aaPredicted RBP11.43□□□□□ -0.58
SDCBP-212ENST00000523483 SNRKQ9NRH2 765 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
SDCBP-212ENST00000523483 VPS37DQ86XT2 251 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 PDE8BO95263 885 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
SDCBP-212ENST00000523483 MTFR1LQ9H019 292 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 AKAP2Q9Y2D5 859 aa11.43□□□□□ -0.58
SDCBP-212ENST00000523483 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 A0A0G2JLW4 131 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 CIAO1O76071 339 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
SDCBP-212ENST00000523483 GRAPQ13588 217 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
SDCBP-212ENST00000523483 ECHDC1Q9NTX5 307 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 TTC39AQ5SRH9 613 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 EDC3Q96F86 508 aaKnown RBP11.42□□□□□ -0.58
SDCBP-212ENST00000523483 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 MINPP1Q9UNW1 487 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
SDCBP-212ENST00000523483 TAF1P21675 1872 aa11.42□□□□□ -0.58
SDCBP-212ENST00000523483 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 ERC2O15083 957 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 CCDC158Q5M9N0 1113 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 BSDC1Q9NW68 430 aaPredicted RBP11.41□□□□□ -0.58
SDCBP-212ENST00000523483 MROH5Q6ZUA9 1318 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 SRGNP10124 158 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 PUM3Q15397 648 aaKnown RBP11.41□□□□□ -0.58
SDCBP-212ENST00000523483 TTC22Q5TAA0 569 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
SDCBP-212ENST00000523483 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
SDCBP-212ENST00000523483 SLC5A1P13866 664 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 SDSP20132 328 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 NPR1P16066 1061 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 GYG1P46976 350 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 PI16Q6UXB8 463 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.58
SDCBP-212ENST00000523483 RGPD4Q7Z3J3 1758 aa11.4□□□□□ -0.58
SDCBP-212ENST00000523483 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-212ENST00000523483 GLRX3O76003 335 aaKnown RBP11.39□□□□□ -0.59
SDCBP-212ENST00000523483 CRY2Q49AN0 593 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 UFL1O94874 794 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 BCAMP50895 628 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 LPIN2Q92539 896 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 MYH3P11055 1940 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 GOLIM4O00461 696 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 KLRK1P26718 216 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 PHKA1P46020 1223 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
SDCBP-212ENST00000523483 ALDH1B1P30837 517 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 MFAP1P55081 439 aaKnown RBP11.38□□□□□ -0.59
SDCBP-212ENST00000523483 PRPF40BQ6NWY9 871 aaKnown RBP11.38□□□□□ -0.59
SDCBP-212ENST00000523483 FSD1Q9BTV5 496 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
SDCBP-212ENST00000523483 DPEP1P16444 411 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 BMP2KLQ5H9B9 411 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
SDCBP-212ENST00000523483 COL4A1P02462 1669 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 G3V3G9 751 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 C21orf2O43822 256 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 PI4K2BQ8TCG2 481 aa11.38□□□□□ -0.59
SDCBP-212ENST00000523483 BBOX1O75936 387 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 GPSM2P81274 684 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
SDCBP-212ENST00000523483 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 ANKRD2Q9GZV1 360 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 TTC41PQ6P2S7 1318 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 SCARF1Q14162 830 aa11.37□□□□□ -0.59
SDCBP-212ENST00000523483 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-212ENST00000523483 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms