RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 UBR3Q6ZT12 1888 aa25.17■■□□□ 1.62
SQLE-206ENST00000523430 ATP2B3Q16720 1220 aa25.17■■□□□ 1.62
SQLE-206ENST00000523430 C3orf67Q6ZVT6 689 aa25.17■■□□□ 1.62
SQLE-206ENST00000523430 EPB41L2O43491 1005 aaKnown RBP25.16■■□□□ 1.62
SQLE-206ENST00000523430 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
SQLE-206ENST00000523430 RFX7Q2KHR2 1363 aa25.16■■□□□ 1.62
SQLE-206ENST00000523430 HSPA4P34932 840 aa25.15■■□□□ 1.62
SQLE-206ENST00000523430 MED23Q9ULK4 1368 aa25.15■■□□□ 1.62
SQLE-206ENST00000523430 ARAP2Q8WZ64 1704 aa25.15■■□□□ 1.62
SQLE-206ENST00000523430 GOLIM4O00461 696 aa25.14■■□□□ 1.61
SQLE-206ENST00000523430 CHGBP05060 677 aa25.14■■□□□ 1.61
SQLE-206ENST00000523430 IFIT1P09914 478 aaKnown RBP25.14■■□□□ 1.61
SQLE-206ENST00000523430 KIAA1211Q6ZU35 1233 aa25.14■■□□□ 1.61
SQLE-206ENST00000523430 ANTXR1Q9H6X2 564 aa25.14■■□□□ 1.61
SQLE-206ENST00000523430 PAG1Q9NWQ8 432 aa25.14■■□□□ 1.61
SQLE-206ENST00000523430 RFC4P35249 363 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 TRAPPC3LQ5T215 181 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 MROH5Q6ZUA9 1318 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 K7ELQ4 463 aaPredicted RBP25.13■■□□□ 1.61
SQLE-206ENST00000523430 PDE8BO95263 885 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 ANAPC15P60006 121 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 PTH1RQ03431 593 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 SLC27A3Q5K4L6 730 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 TTC39AQ5SRH9 613 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 GORABQ5T7V8 394 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 SNRKQ9NRH2 765 aa25.13■■□□□ 1.61
SQLE-206ENST00000523430 KBTBD3Q8NAB2 608 aa25.12■■□□□ 1.61
SQLE-206ENST00000523430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.12■■□□□ 1.61
SQLE-206ENST00000523430 CCDC171Q6TFL3 1326 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 CCDC158Q5M9N0 1113 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 HELBQ8NG08 1087 aaPredicted RBP25.11■■□□□ 1.61
SQLE-206ENST00000523430 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.11■■□□□ 1.61
SQLE-206ENST00000523430 SCARF1Q14162 830 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 ZNF589Q86UQ0 364 aaPredicted RBP25.11■■□□□ 1.61
SQLE-206ENST00000523430 NBPF5PQ86XG9 351 aaPredicted RBP25.11■■□□□ 1.61
SQLE-206ENST00000523430 IL17RAQ96F46 866 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 NYXQ9GZU5 481 aa25.11■■□□□ 1.61
SQLE-206ENST00000523430 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
SQLE-206ENST00000523430 GTF2E1P29083 439 aaPredicted RBP25.1■■□□□ 1.61
SQLE-206ENST00000523430 NBR1Q14596 966 aa25.1■■□□□ 1.61
SQLE-206ENST00000523430 IGHMBP2P38935 993 aaKnown RBP25.09■■□□□ 1.61
SQLE-206ENST00000523430 PUM3Q15397 648 aaKnown RBP25.09■■□□□ 1.61
SQLE-206ENST00000523430 ADRA2BP18089 450 aa25.09■■□□□ 1.61
SQLE-206ENST00000523430 SF3B3Q15393 1217 aaKnown RBP25.09■■□□□ 1.61
SQLE-206ENST00000523430 CCDC24Q8N4L8 307 aa25.09■■□□□ 1.61
SQLE-206ENST00000523430 A0A1B0GUL6 1792 aa25.08■■□□□ 1.61
SQLE-206ENST00000523430 ST18O60284 1047 aa25.08■■□□□ 1.61
SQLE-206ENST00000523430 SLC10A5Q5PT55 438 aa25.08■■□□□ 1.61
SQLE-206ENST00000523430 TAF5LO75529 589 aa25.07■■□□□ 1.6
SQLE-206ENST00000523430 FGFR2P21802 821 aa25.07■■□□□ 1.6
SQLE-206ENST00000523430 PROM2Q8N271 834 aa25.07■■□□□ 1.6
SQLE-206ENST00000523430 SNX14Q9Y5W7 946 aa25.07■■□□□ 1.6
SQLE-206ENST00000523430 TAF1P21675 1872 aa25.07■■□□□ 1.6
SQLE-206ENST00000523430 RXRBP28702 533 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 FKBP4Q02790 459 aaKnown RBP eCLIP25.06■■□□□ 1.6
SQLE-206ENST00000523430 TXNRD1Q16881 649 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 SLFNL1Q499Z3 407 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 PI16Q6UXB8 463 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 RASEFQ8IZ41 740 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 CARMIL3Q8ND23 1372 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 SNAP23O00161 211 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 NEK4P51957 841 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 NFIXQ14938 502 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 LPIN2Q92539 896 aa25.06■■□□□ 1.6
SQLE-206ENST00000523430 SEC62Q99442 399 aaKnown RBP25.06■■□□□ 1.6
SQLE-206ENST00000523430 CDC5LQ99459 802 aaKnown RBP25.06■■□□□ 1.6
SQLE-206ENST00000523430 MCAMP43121 646 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 ZAP70P43403 619 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 CCDC129Q6ZRS4 1044 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 UPF3BQ9BZI7 483 aaKnown RBP25.04■■□□□ 1.6
SQLE-206ENST00000523430 RBM8AQ9Y5S9 174 aaKnown RBP25.04■■□□□ 1.6
SQLE-206ENST00000523430 PRPF40BQ6NWY9 871 aaKnown RBP25.04■■□□□ 1.6
SQLE-206ENST00000523430 TPTE2Q6XPS3 522 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 FOXD4L1Q9NU39 408 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 AKAP11Q9UKA4 1901 aa25.04■■□□□ 1.6
SQLE-206ENST00000523430 SSFA2P28290 1259 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 PHKA1P46020 1223 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 CHRNDQ07001 517 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 CCDC102BQ68D86 513 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 ANKRD18AQ8IVF6 992 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 MAP4K1Q92918 833 aa25.03■■□□□ 1.6
SQLE-206ENST00000523430 SLC5A1P13866 664 aa25.02■■□□□ 1.6
SQLE-206ENST00000523430 RGS17Q9UGC6 210 aaPredicted RBP25.02■■□□□ 1.6
SQLE-206ENST00000523430 TNS1Q9HBL0 1735 aaKnown RBP25.02■■□□□ 1.6
SQLE-206ENST00000523430 DDIT3P35638 169 aa25.02■■□□□ 1.6
SQLE-206ENST00000523430 NECTIN1Q15223 517 aa25.02■■□□□ 1.6
SQLE-206ENST00000523430 CELF1Q92879 486 aaKnown RBP25.02■■□□□ 1.6
SQLE-206ENST00000523430 ZNF512BQ96KM6 892 aaPredicted RBP25.02■■□□□ 1.6
SQLE-206ENST00000523430 GYS1P13807 737 aa25.01■■□□□ 1.59
SQLE-206ENST00000523430 MCMDC2Q4G0Z9 681 aa25.01■■□□□ 1.59
SQLE-206ENST00000523430 NLRP3Q96P20 1036 aa25.01■■□□□ 1.59
SQLE-206ENST00000523430 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
SQLE-206ENST00000523430 ARID4AP29374 1257 aaPredicted RBP25■■□□□ 1.59
SQLE-206ENST00000523430 KCNB2Q92953 911 aa25■■□□□ 1.59
SQLE-206ENST00000523430 APBA3O96018 575 aa25■■□□□ 1.59
SQLE-206ENST00000523430 KCNJ4P48050 445 aa25■■□□□ 1.59
SQLE-206ENST00000523430 ZMYM1Q5SVZ6 1142 aa25■■□□□ 1.59
SQLE-206ENST00000523430 CREB3L3Q68CJ9 461 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms