RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 TRPC6Q9Y210 931 aa7.99□□□□□ -1.13
SHPRH-210ENST00000523276 BCL9O00512 1426 aa7.99□□□□□ -1.13
SHPRH-210ENST00000523276 COL22A1Q8NFW1 1626 aaPredicted RBP7.99□□□□□ -1.13
SHPRH-210ENST00000523276 PRPF40AO75400 957 aaKnown RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 TAF5LO75529 589 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 ZSCAN31Q96LW9 406 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 DNAJC2Q99543 621 aaKnown RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 COL16A1Q07092 1604 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 ZNF609O15014 1411 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 PLCH1Q4KWH8 1693 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 ROBO1Q9Y6N7 1651 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 MAP3K15Q6ZN16 1313 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 WDR33Q9C0J8 1336 aaKnown RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 PCCAP05165 728 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 PSMA5P28066 241 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 LRRC24Q50LG9 513 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 RNF20Q5VTR2 975 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 GAS2L3Q86XJ1 694 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 TICAM2Q86XR7 235 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 PLA2G12BQ9BX93 195 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 RYDENQ9NUL5 291 aaKnown RBP7.98□□□□□ -1.13
SHPRH-210ENST00000523276 HMG20BQ9P0W2 317 aa7.98□□□□□ -1.13
SHPRH-210ENST00000523276 LARGE1O95461 756 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 KBTBD3Q8NAB2 608 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
SHPRH-210ENST00000523276 GPT2Q8TD30 523 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
SHPRH-210ENST00000523276 CHAMP1Q96JM3 812 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 SLC4A9Q96Q91 983 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
SHPRH-210ENST00000523276 PANK2Q9BZ23 570 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 ALDH8A1Q9H2A2 487 aaPredicted RBP7.97□□□□□ -1.13
SHPRH-210ENST00000523276 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
SHPRH-210ENST00000523276 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 PALLDQ8WX93 1383 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 SH3TC1Q8TE82 1336 aa7.97□□□□□ -1.13
SHPRH-210ENST00000523276 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.13
SHPRH-210ENST00000523276 EXOC5O00471 708 aa7.96□□□□□ -1.13
SHPRH-210ENST00000523276 CYP19A1P11511 503 aaPredicted RBP7.96□□□□□ -1.13
SHPRH-210ENST00000523276 ZNF445P59923 1031 aa7.96□□□□□ -1.13
SHPRH-210ENST00000523276 GIGYF2Q6Y7W6 1299 aaKnown RBP7.96□□□□□ -1.13
SHPRH-210ENST00000523276 DDX46Q7L014 1031 aaKnown RBP7.96□□□□□ -1.13
SHPRH-210ENST00000523276 NEUROD6Q96NK8 337 aa7.96□□□□□ -1.13
SHPRH-210ENST00000523276 PUS3Q9BZE2 481 aaKnown RBP7.96□□□□□ -1.13
SHPRH-210ENST00000523276 SMC3Q9UQE7 1217 aa7.96□□□□□ -1.13
SHPRH-210ENST00000523276 CDHR2Q9BYE9 1310 aa7.96□□□□□ -1.13
SHPRH-210ENST00000523276 A0A1B0GUL7 405 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 MBD3O95983 291 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 CSF1RP07333 972 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 NCLP19338 710 aaKnown RBP7.96□□□□□ -1.14
SHPRH-210ENST00000523276 RPS6KB1P23443 525 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 TIMM10P62072 90 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 ZSCAN23Q3MJ62 389 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 MCMDC2Q4G0Z9 681 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 HSP90AB3PQ58FF7 597 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 CAVIN1Q6NZI2 390 aaKnown RBP7.96□□□□□ -1.14
SHPRH-210ENST00000523276 BLOC1S2Q6QNY1 142 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.96□□□□□ -1.14
SHPRH-210ENST00000523276 PAG1Q9NWQ8 432 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 TAF6LQ9Y6J9 622 aa7.96□□□□□ -1.14
SHPRH-210ENST00000523276 GOLIM4O00461 696 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 STX6O43752 255 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ZSCAN22P10073 491 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 SYT1P21579 422 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ST3GAL1Q11201 340 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 KRT32Q14532 448 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ANKRD1Q15327 319 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 HLFQ16534 295 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ME3Q16798 604 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 NLRP10Q86W26 655 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CCDC83Q8IWF9 413 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 FAM89AQ96GI7 184 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 SEC62Q99442 399 aaKnown RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CDCA7Q9BWT1 371 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CEP126Q9P2H0 1117 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 TPCN1Q9ULQ1 816 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CHGBP05060 677 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 PYGBP11216 843 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 GJB2P29033 226 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 MKRN3Q13064 507 aaKnown RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 COL9A3Q14050 684 aaPredicted RBP7.95□□□□□ -1.14
SHPRH-210ENST00000523276 CCDC129Q6ZRS4 1044 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 IFNL1Q8IU54 200 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 AKAP2Q9Y2D5 859 aa7.95□□□□□ -1.14
SHPRH-210ENST00000523276 ERVV-1B6SEH8 477 aa7.94□□□□□ -1.14
SHPRH-210ENST00000523276 GPTP24298 496 aa7.94□□□□□ -1.14
SHPRH-210ENST00000523276 IL6STP40189 918 aaPredicted RBP7.94□□□□□ -1.14
SHPRH-210ENST00000523276 PRIM1P49642 420 aaKnown RBP7.94□□□□□ -1.14
SHPRH-210ENST00000523276 IFIT5Q13325 482 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms