RNA–Protein interactions for RNA: ENST00000523015.1

DENND3-218, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-218ENST00000523015 DBNDD1Q9H9R9 158 aa8.69□□□□□ -1.02
DENND3-218ENST00000523015 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
DENND3-218ENST00000523015 RTL9Q8NET4 1388 aa8.69□□□□□ -1.02
DENND3-218ENST00000523015 PRUNE2Q8WUY3 3088 aa8.69□□□□□ -1.02
DENND3-218ENST00000523015 PSME4Q14997 1843 aa8.68□□□□□ -1.02
DENND3-218ENST00000523015 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
DENND3-218ENST00000523015 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
DENND3-218ENST00000523015 FKBP1BP68106 108 aa8.68□□□□□ -1.02
DENND3-218ENST00000523015 SREBF2Q12772 1141 aa8.68□□□□□ -1.02
DENND3-218ENST00000523015 SUSD4Q5VX71 490 aa8.68□□□□□ -1.02
DENND3-218ENST00000523015 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
DENND3-218ENST00000523015 COL3A1P02461 1466 aaPredicted RBP8.68□□□□□ -1.02
DENND3-218ENST00000523015 UBE2Q2LH0YL09 131 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 COL4A1P02462 1669 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 RPS12P25398 132 aaKnown RBP8.67□□□□□ -1.02
DENND3-218ENST00000523015 TM4SF4P48230 202 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 GSE1Q14687 1217 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
DENND3-218ENST00000523015 KIF6Q6ZMV9 814 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 MAP3K15Q6ZN16 1313 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 NGEFQ8N5V2 710 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 CFHR5Q9BXR6 569 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
DENND3-218ENST00000523015 SCAF8Q9UPN6 1271 aaKnown RBP8.67□□□□□ -1.02
DENND3-218ENST00000523015 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
DENND3-218ENST00000523015 ECE2O60344 883 aa8.66□□□□□ -1.02
DENND3-218ENST00000523015 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
DENND3-218ENST00000523015 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
DENND3-218ENST00000523015 CD99L2Q8TCZ2 262 aa8.66□□□□□ -1.02
DENND3-218ENST00000523015 PANK3Q9H999 370 aa8.66□□□□□ -1.02
DENND3-218ENST00000523015 SP8Q8IXZ3 490 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 ZNF333Q96JL9 665 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 NLRP3Q96P20 1036 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 TMEM106CQ9BVX2 250 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 PTPN22Q9Y2R2 807 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 ZSWIM8A7E2V4 1837 aa8.65□□□□□ -1.02
DENND3-218ENST00000523015 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
DENND3-218ENST00000523015 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
DENND3-218ENST00000523015 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
DENND3-218ENST00000523015 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
DENND3-218ENST00000523015 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
DENND3-218ENST00000523015 SCARF1Q14162 830 aa8.64□□□□□ -1.03
DENND3-218ENST00000523015 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
DENND3-218ENST00000523015 PRAMEF18Q5VWM3 479 aa8.64□□□□□ -1.03
DENND3-218ENST00000523015 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
DENND3-218ENST00000523015 NUBP1P53384 320 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 CAP1Q01518 475 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 GRAPQ13588 217 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 DOK7Q18PE1 504 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 PPP1R42Q7Z4L9 355 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 GRAPLQ8TC17 118 aaPredicted RBP8.63□□□□□ -1.03
DENND3-218ENST00000523015 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 ERO1AQ96HE7 468 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 LRCH3Q96II8 777 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
DENND3-218ENST00000523015 ZNF646O15015 1829 aaPredicted RBP8.63□□□□□ -1.03
DENND3-218ENST00000523015 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 IGF2BP3O00425 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
DENND3-218ENST00000523015 BBOX1O75936 387 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 ALDH1A1P00352 501 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 PRKAR2AP13861 404 aaKnown RBP8.62□□□□□ -1.03
DENND3-218ENST00000523015 HCLS1P14317 486 aaPredicted RBP8.62□□□□□ -1.03
DENND3-218ENST00000523015 MYL6BP14649 208 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 ZNF280AP59817 542 aaPredicted RBP8.62□□□□□ -1.03
DENND3-218ENST00000523015 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 SLC9C1Q4G0N8 1177 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 DDX46Q7L014 1031 aaKnown RBP8.62□□□□□ -1.03
DENND3-218ENST00000523015 MCM10Q7L590 875 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 COL25A1Q9BXS0 654 aaPredicted RBP8.62□□□□□ -1.03
DENND3-218ENST00000523015 PRO3102Q9H379 93 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 OTOFQ9HC10 1997 aa8.62□□□□□ -1.03
DENND3-218ENST00000523015 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
DENND3-218ENST00000523015 CRHR2Q13324 411 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 PRKG1Q13976 671 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 PARP10Q53GL7 1025 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 IFNL1Q8IU54 200 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 UTP14AQ9BVJ6 771 aaKnown RBP8.61□□□□□ -1.03
DENND3-218ENST00000523015 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.61□□□□□ -1.03
DENND3-218ENST00000523015 RRP7AQ9Y3A4 280 aaKnown RBP8.61□□□□□ -1.03
DENND3-218ENST00000523015 FARP1Q9Y4F1 1045 aaPredicted RBP8.61□□□□□ -1.03
DENND3-218ENST00000523015 PTCH2Q9Y6C5 1203 aa8.61□□□□□ -1.03
DENND3-218ENST00000523015 VIL1P09327 827 aaKnown RBP8.6□□□□□ -1.03
DENND3-218ENST00000523015 NF2P35240 595 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 GPSM2P81274 684 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
DENND3-218ENST00000523015 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 DPF3Q92784 378 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 SHISA4Q96DD7 197 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 MYOZ2Q9NPC6 264 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 POLLQ9UGP5 575 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
DENND3-218ENST00000523015 KNSTRNQ9Y448 316 aa8.6□□□□□ -1.03
DENND3-218ENST00000523015 MANSC4A6NHS7 340 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms