RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 BATF3Q9NR55 127 aa9.53□□□□□ -0.88
HMGB4-204ENST00000522796 RGL1Q9NZL6 768 aa9.53□□□□□ -0.88
HMGB4-204ENST00000522796 AK9Q5TCS8 1911 aa9.53□□□□□ -0.88
HMGB4-204ENST00000522796 RGL2O15211 777 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 LIG3P49916 1009 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 CLASRPQ8N2M8 674 aaKnown RBP9.52□□□□□ -0.88
HMGB4-204ENST00000522796 MAB21L3Q8N8X9 362 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 SPC24Q8NBT2 197 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.88
HMGB4-204ENST00000522796 TSGA10Q9BZW7 698 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 ORC3Q9UBD5 711 aaPredicted RBP9.52□□□□□ -0.88
HMGB4-204ENST00000522796 WWC3Q9ULE0 1092 aa9.52□□□□□ -0.88
HMGB4-204ENST00000522796 OPA1O60313 960 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 PARNO95453 639 aaKnown RBP9.52□□□□□ -0.89
HMGB4-204ENST00000522796 HCLS1P14317 486 aaPredicted RBP9.52□□□□□ -0.89
HMGB4-204ENST00000522796 SMARCA1P28370 1054 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 RANBP1P43487 201 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 MFN1Q8IWA4 741 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 KCNN1Q92952 543 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 MMADHCQ9H3L0 296 aaPredicted RBP9.52□□□□□ -0.89
HMGB4-204ENST00000522796 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
HMGB4-204ENST00000522796 EPRSP07814 1512 aaKnown RBP9.52□□□□□ -0.89
HMGB4-204ENST00000522796 AHCYL1O43865 530 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 MYCLP1P12525 358 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 CA8P35219 290 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 CDR1P51861 262 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 ZSCAN25Q6NSZ9 544 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 MIPOL1Q8TD10 442 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 HFM1A2PYH4 1435 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 BICDL2A1A5D9 508 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 TRIM64CA6NLI5 447 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 FESP07332 822 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC158Q5M9N0 1113 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 ARMC9Q7Z3E5 817 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 TRMT2AQ8IZ69 625 aaKnown RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 ACBD3Q9H3P7 528 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 KCND1Q9NSA2 647 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 MAP3K20Q9NYL2 800 aaKnown RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 GABBR1Q9UBS5 961 aa9.51□□□□□ -0.89
HMGB4-204ENST00000522796 BARX2Q9UMQ3 279 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 U3KPZ7 1027 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC194A0A1B0GVG4 234 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 BOLA2-SMG1P6H3BVE0 249 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 NPHP1O15259 732 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 NSUN2Q08J23 767 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGB4-204ENST00000522796 USP4Q13107 963 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC93Q567U6 631 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC183Q5T5S1 534 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CC2D1AQ6P1N0 951 aaPredicted RBP9.5□□□□□ -0.89
HMGB4-204ENST00000522796 GIMAP6Q6P9H5 292 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC102AQ96A19 550 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 SPDL1Q96EA4 605 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CLASP1Q7Z460 1538 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 AP5Z1O43299 807 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 TLDC1Q6P9B6 456 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC80Q76M96 950 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.5□□□□□ -0.89
HMGB4-204ENST00000522796 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
HMGB4-204ENST00000522796 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 MRFAP1Q9Y605 127 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 ATP10AO60312 1499 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 PTPN23Q9H3S7 1636 aa9.5□□□□□ -0.89
HMGB4-204ENST00000522796 ZNF521Q96K83 1311 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
HMGB4-204ENST00000522796 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 E2F6O75461 281 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 PKD2Q13563 968 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 PKP1Q13835 747 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ARHGAP22Q7Z5H3 698 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 PARP9Q8IXQ6 854 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 UBXN4Q92575 508 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 EPAS1Q99814 870 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 CD248Q9HCU0 757 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 GPCPD1Q9NPB8 672 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 GINM1Q9NU53 330 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 H3BQF6 201 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
HMGB4-204ENST00000522796 SEC31AO94979 1220 aaKnown RBP9.49□□□□□ -0.89
HMGB4-204ENST00000522796 MAGEA10P43363 369 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ZNF132P52740 706 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 LRMPQ12912 555 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 KIAA0825Q8IV33 1275 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
HMGB4-204ENST00000522796 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 SCLT1Q96NL6 688 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ATP6V0A4Q9HBG4 840 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 VPS18Q9P253 973 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ZDHHC9Q9Y397 364 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ATAD2Q6PL18 1390 aa9.49□□□□□ -0.89
HMGB4-204ENST00000522796 ATXN2Q99700 1313 aaKnown RBP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 PDLIM1O00151 329 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 SRGAP3O43295 1099 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 NEMFO60524 1076 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms