RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
GINS4-208ENST00000522642 PTCH2Q9Y6C5 1203 aa9.6□□□□□ -0.87
GINS4-208ENST00000522642 ABCC4O15439 1325 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 C6orf229H3BNL8 230 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 ECE2O60344 883 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 BMP8BP34820 402 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
GINS4-208ENST00000522642 LRIT3Q3SXY7 679 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
GINS4-208ENST00000522642 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
GINS4-208ENST00000522642 RPTORQ8N122 1335 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 UNCXA6NJT0 531 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 HMOX1P09601 288 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 USP17L8P0C7I0 530 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 GPTP24298 496 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
GINS4-208ENST00000522642 CRHR2Q13324 411 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 SUSD4Q5VX71 490 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 STAP2Q9UGK3 403 aa9.58□□□□□ -0.88
GINS4-208ENST00000522642 ANGEL1Q9UNK9 670 aaKnown RBP9.58□□□□□ -0.88
GINS4-208ENST00000522642 NSFL1CQ9UNZ2 370 aaKnown RBP9.58□□□□□ -0.88
GINS4-208ENST00000522642 ASTN2O75129 1339 aaPredicted RBP9.57□□□□□ -0.88
GINS4-208ENST00000522642 MAP3K15Q6ZN16 1313 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 GRAPQ13588 217 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 Q7L0L9 218 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 IL17REQ8NFR9 667 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
GINS4-208ENST00000522642 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
GINS4-208ENST00000522642 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
GINS4-208ENST00000522642 ZFYVE28Q9HCC9 887 aa9.57□□□□□ -0.88
GINS4-208ENST00000522642 NBPF26B4DH59 902 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 PPP1R12BO60237 982 aaPredicted RBP9.56□□□□□ -0.88
GINS4-208ENST00000522642 GJB1P08034 283 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
GINS4-208ENST00000522642 GJA8P48165 433 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 MMP14P50281 582 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
GINS4-208ENST00000522642 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
GINS4-208ENST00000522642 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 SH3TC2Q8TF17 1288 aa9.56□□□□□ -0.88
GINS4-208ENST00000522642 IGF2BP3O00425 579 aaKnown RBP eCLIP9.55□□□□□ -0.88
GINS4-208ENST00000522642 FARP2O94887 1054 aaPredicted RBP9.55□□□□□ -0.88
GINS4-208ENST00000522642 NTSR2O95665 410 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 HOXD10P28358 340 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 UBXN2AP68543 259 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 PRKG1Q13976 671 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 DOK7Q18PE1 504 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 PRAMEF18Q5VWM3 479 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 WNK4Q96J92 1243 aa9.55□□□□□ -0.88
GINS4-208ENST00000522642 SLC51AQ86UW1 340 aa9.54□□□□□ -0.88
GINS4-208ENST00000522642 APOBEC3FQ8IUX4 373 aaKnown RBP9.54□□□□□ -0.88
GINS4-208ENST00000522642 ZNF34Q8IZ26 560 aa9.54□□□□□ -0.88
GINS4-208ENST00000522642 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
GINS4-208ENST00000522642 RTL9Q8NET4 1388 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 TNFRSF10AO00220 468 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 KCNQ3O43525 872 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
GINS4-208ENST00000522642 FAM109BQ6ICB4 259 aaPredicted RBP9.53□□□□□ -0.88
GINS4-208ENST00000522642 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
GINS4-208ENST00000522642 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 UBE2Q1Q7Z7E8 422 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 TDHQ8IZJ6 230 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
GINS4-208ENST00000522642 SHISA4Q96DD7 197 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 GDF15Q99988 308 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 KCNQ5Q9NR82 932 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 BIN2Q9UBW5 565 aaPredicted RBP9.53□□□□□ -0.88
GINS4-208ENST00000522642 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
GINS4-208ENST00000522642 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
GINS4-208ENST00000522642 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
GINS4-208ENST00000522642 BCAMP50895 628 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 MAP3K11Q16584 847 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
GINS4-208ENST00000522642 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 IRS2Q9Y4H2 1338 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 A0A0C4DFX4 3053 aa9.52□□□□□ -0.89
GINS4-208ENST00000522642 KDM3BQ7LBC6 1761 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 TMEM265A0A087WTH1 108 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 USP17L3A6NCW0 530 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 USP17L4A6NCW7 530 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 DIAPH1O60610 1272 aaKnown RBP9.51□□□□□ -0.89
GINS4-208ENST00000522642 CCL5P13501 91 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 GRK4P32298 578 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 MTFR1Q15390 333 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 SUPT20HL1Q3ZLR7 823 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 USP17L1Q7RTZ2 530 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 RAET1EQ8TD07 263 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 POLR3GLQ9BT43 218 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 POLLQ9UGP5 575 aa9.51□□□□□ -0.89
GINS4-208ENST00000522642 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
GINS4-208ENST00000522642 SZT2Q5T011 3432 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms