RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 GPSM2P81274 684 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 ANGEL2Q5VTE6 544 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 POLLQ9UGP5 575 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 TRMT112Q9UI30 125 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 RTL9Q8NET4 1388 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 COL4A1P02462 1669 aa10.6□□□□□ -0.71
PDGFRB-210ENST00000522466 SCARF1Q14162 830 aa10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 CELF1Q92879 486 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 R3HDMLQ9H3Y0 253 aa10.59□□□□□ -0.71
PDGFRB-210ENST00000522466 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 GPR25O00155 361 aa10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 PDIA6Q15084 440 aa10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 RTL5Q5HYW3 569 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-210ENST00000522466 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 G3V3G9 751 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 RPS12P25398 132 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 PPP2R1AP30153 589 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 COPS6Q7L5N1 327 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 XAGE3Q8WTP9 111 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 PAPPA2Q9BXP8 1791 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
PDGFRB-210ENST00000522466 VIL1P09327 827 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 PRKG1Q13976 671 aa10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 EYA3Q99504 573 aa10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 TSPYL4Q9UJ04 414 aa10.56□□□□□ -0.72
PDGFRB-210ENST00000522466 FKTNO75072 461 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 NEFMP07197 916 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 HSP90AB3PQ58FF7 597 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 FAM89AQ96GI7 184 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 ZC3H12CQ9C0D7 883 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
PDGFRB-210ENST00000522466 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
PDGFRB-210ENST00000522466 UFL1O94874 794 aa10.54□□□□□ -0.72
PDGFRB-210ENST00000522466 POLA2Q14181 598 aa10.54□□□□□ -0.72
PDGFRB-210ENST00000522466 TM4SF4P48230 202 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 FXR1P51114 621 aaKnown RBP eCLIP10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 FKBP1BP68106 108 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 TRIM17Q9Y577 477 aa10.53□□□□□ -0.72
PDGFRB-210ENST00000522466 PSME4Q14997 1843 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 KIAA0100Q14667 2235 aaKnown RBP10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 EN2P19622 333 aaPredicted RBP10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 ZNF280AP59817 542 aaPredicted RBP10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 KRT24Q2M2I5 525 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 NBPF9Q3BBW0 867 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 MXD3Q9BW11 206 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 ANKIB1Q9P2G1 1089 aa10.52□□□□□ -0.73
PDGFRB-210ENST00000522466 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 RPS8P62241 208 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 PTPN12Q05209 780 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 SREBF2Q12772 1141 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 SF3B3Q15393 1217 aaKnown RBP10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 AGBL3Q8NEM8 1001 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 PLEKHF1Q96S99 279 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 GGA1Q9UJY5 639 aa10.51□□□□□ -0.73
PDGFRB-210ENST00000522466 IRS4O14654 1257 aaPredicted RBP10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 CD99L2Q8TCZ2 262 aa10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 CHPF2Q9P2E5 772 aa10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 COLQQ9Y215 455 aaPredicted RBP10.5□□□□□ -0.73
PDGFRB-210ENST00000522466 WTIPA6NIX2 430 aaPredicted RBP10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 SASH1O94885 1247 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 NF2P35240 595 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 NOM1Q5C9Z4 860 aaKnown RBP10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 GMLQ99445 158 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 ISCA1Q9BUE6 129 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 MAPK8IP3Q9UPT6 1336 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 SPEF2Q9C093 1822 aa10.49□□□□□ -0.73
PDGFRB-210ENST00000522466 MKI67P46013 3256 aaKnown RBP10.48□□□□□ -0.73
PDGFRB-210ENST00000522466 RBBP6Q7Z6E9 1792 aaKnown RBP10.48□□□□□ -0.73
PDGFRB-210ENST00000522466 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms