RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CEP350Q5VT06 3117 aa10.87□□□□□ -0.67
PVT1-213ENST00000522414 ADAMTS7Q9UKP4 1686 aa10.86□□□□□ -0.67
PVT1-213ENST00000522414 A0A0G2JLW4 131 aa10.86□□□□□ -0.67
PVT1-213ENST00000522414 RFC4P35249 363 aa10.86□□□□□ -0.67
PVT1-213ENST00000522414 NLGN1Q8N2Q7 840 aa10.86□□□□□ -0.67
PVT1-213ENST00000522414 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
PVT1-213ENST00000522414 GYS1P13807 737 aa10.85□□□□□ -0.67
PVT1-213ENST00000522414 USP46P62068 366 aa10.85□□□□□ -0.67
PVT1-213ENST00000522414 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
PVT1-213ENST00000522414 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
PVT1-213ENST00000522414 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
PVT1-213ENST00000522414 INTS5Q6P9B9 1019 aaKnown RBP10.85□□□□□ -0.67
PVT1-213ENST00000522414 ZSCAN1Q8NBB4 408 aa10.85□□□□□ -0.67
PVT1-213ENST00000522414 ZNF526Q8TF50 670 aaPredicted RBP10.85□□□□□ -0.67
PVT1-213ENST00000522414 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
PVT1-213ENST00000522414 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
PVT1-213ENST00000522414 CAPN5O15484 640 aaPredicted RBP10.84□□□□□ -0.67
PVT1-213ENST00000522414 DIAPH1O60610 1272 aaKnown RBP10.84□□□□□ -0.67
PVT1-213ENST00000522414 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
PVT1-213ENST00000522414 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
PVT1-213ENST00000522414 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
PVT1-213ENST00000522414 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
PVT1-213ENST00000522414 SCN11AQ9UI33 1791 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 H3BM21 787 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 RNMTO43148 476 aaKnown RBP10.83□□□□□ -0.68
PVT1-213ENST00000522414 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 DNAJC10Q8IXB1 793 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 CNTNAP4Q9C0A0 1308 aa10.83□□□□□ -0.68
PVT1-213ENST00000522414 MRC1P22897 1456 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 LOC100996750A0A140TA64 210 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 DPEP1P16444 411 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 IRF7Q92985 503 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 KRTAP4-6Q9BYQ5 205 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 PARP3Q9Y6F1 533 aa10.82□□□□□ -0.68
PVT1-213ENST00000522414 KIF13BQ9NQT8 1826 aa10.81□□□□□ -0.68
PVT1-213ENST00000522414 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
PVT1-213ENST00000522414 MYH14Q7Z406 1995 aaKnown RBP10.81□□□□□ -0.68
PVT1-213ENST00000522414 FAM181BA6NEQ2 426 aa10.81□□□□□ -0.68
PVT1-213ENST00000522414 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
PVT1-213ENST00000522414 TGFB2P61812 414 aa10.81□□□□□ -0.68
PVT1-213ENST00000522414 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
PVT1-213ENST00000522414 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
PVT1-213ENST00000522414 IRF6O14896 467 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
PVT1-213ENST00000522414 KCNA3P22001 575 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 SH3BP2P78314 561 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 DDR1Q08345 913 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 ARHGAP27Q6ZUM4 889 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
PVT1-213ENST00000522414 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 ATP10DQ9P241 1426 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 TJP1Q07157 1748 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 KIAA1551Q9HCM1 1747 aa10.8□□□□□ -0.68
PVT1-213ENST00000522414 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
PVT1-213ENST00000522414 TM4SF1P30408 202 aa10.79□□□□□ -0.68
PVT1-213ENST00000522414 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
PVT1-213ENST00000522414 CANXP27824 592 aaKnown RBP10.78□□□□□ -0.68
PVT1-213ENST00000522414 CHRNA5P30532 468 aa10.78□□□□□ -0.68
PVT1-213ENST00000522414 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
PVT1-213ENST00000522414 RETREG3Q86VR2 466 aa10.78□□□□□ -0.68
PVT1-213ENST00000522414 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
PVT1-213ENST00000522414 USP42Q9H9J4 1324 aaKnown RBP10.78□□□□□ -0.68
PVT1-213ENST00000522414 UBR2Q8IWV8 1755 aa10.77□□□□□ -0.68
PVT1-213ENST00000522414 PXDNLA1KZ92 1463 aa10.77□□□□□ -0.69
PVT1-213ENST00000522414 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
PVT1-213ENST00000522414 ZBTB1Q9Y2K1 713 aa10.77□□□□□ -0.69
PVT1-213ENST00000522414 GNAT3A8MTJ3 354 aa10.76□□□□□ -0.69
PVT1-213ENST00000522414 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
PVT1-213ENST00000522414 NFIXQ14938 502 aa10.76□□□□□ -0.69
PVT1-213ENST00000522414 PIM2Q9P1W9 311 aa10.76□□□□□ -0.69
PVT1-213ENST00000522414 NARFQ9UHQ1 456 aa10.76□□□□□ -0.69
PVT1-213ENST00000522414 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
PVT1-213ENST00000522414 SOS1Q07889 1333 aaPredicted RBP10.76□□□□□ -0.69
PVT1-213ENST00000522414 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 N4BP2Q86UW6 1770 aaPredicted RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 BRCA1P38398 1863 aaKnown RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 KCNQ3O43525 872 aa10.75□□□□□ -0.69
PVT1-213ENST00000522414 DALRD3Q5D0E6 543 aaKnown RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 FAM217BQ9NTX9 383 aaPredicted RBP10.75□□□□□ -0.69
PVT1-213ENST00000522414 ADCY9O60503 1353 aa10.75□□□□□ -0.69
PVT1-213ENST00000522414 C10orf71Q711Q0 1435 aa10.75□□□□□ -0.69
PVT1-213ENST00000522414 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 STARD3NLO95772 234 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 PRKAR2BP31323 418 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 TEFQ10587 303 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 BICDL1Q6ZP65 573 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 TTC5Q8N0Z6 440 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
PVT1-213ENST00000522414 A1BGP04217 495 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 SERPINB2P05120 415 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 PPP2R1AP30153 589 aa10.73□□□□□ -0.69
PVT1-213ENST00000522414 EIF5P55010 431 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms