RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 ANKRD36CQ5JPF3 1778 aa11.71□□□□□ -0.54
SPARC-205ENST00000522348 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
SPARC-205ENST00000522348 PLSCR1O15162 318 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 ST18O60284 1047 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 HSPA4P34932 840 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
SPARC-205ENST00000522348 KBTBD3Q8NAB2 608 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 LPIN2Q92539 896 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 DNAJC2Q99543 621 aaKnown RBP11.7□□□□□ -0.54
SPARC-205ENST00000522348 LSG1Q9H089 658 aaKnown RBP11.7□□□□□ -0.54
SPARC-205ENST00000522348 PAG1Q9NWQ8 432 aa11.7□□□□□ -0.54
SPARC-205ENST00000522348 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
SPARC-205ENST00000522348 RFX7Q2KHR2 1363 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 SSFA2P28290 1259 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 NMIQ13287 307 aaPredicted RBP11.69□□□□□ -0.54
SPARC-205ENST00000522348 DEFB132Q7Z7B7 95 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 SEC31BQ9NQW1 1179 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 ZNF609O15014 1411 aa11.69□□□□□ -0.54
SPARC-205ENST00000522348 K7ELQ4 463 aaPredicted RBP11.68□□□□□ -0.54
SPARC-205ENST00000522348 UQCRFS1P1P0C7P4 283 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 MCM2P49736 904 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 EN1Q05925 392 aaPredicted RBP11.68□□□□□ -0.54
SPARC-205ENST00000522348 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
SPARC-205ENST00000522348 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 SMIM5Q71RC9 77 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 ANKRD18AQ8IVF6 992 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 HELLSQ9NRZ9 838 aa11.68□□□□□ -0.54
SPARC-205ENST00000522348 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 LY75O60449 1722 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
SPARC-205ENST00000522348 GOLIM4O00461 696 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 PHF14O94880 888 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 SLC5A1P13866 664 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 FGFR2P21802 821 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 ADORA1P30542 326 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
SPARC-205ENST00000522348 BSDC1Q9NW68 430 aaPredicted RBP11.67□□□□□ -0.54
SPARC-205ENST00000522348 SBF2Q86WG5 1849 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 TUBGCP6Q96RT7 1819 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
SPARC-205ENST00000522348 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
SPARC-205ENST00000522348 NEK4P51957 841 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPARC-205ENST00000522348 TTF1Q15361 905 aaPredicted RBP11.66□□□□□ -0.54
SPARC-205ENST00000522348 ZSCAN25Q6NSZ9 544 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
SPARC-205ENST00000522348 PROM2Q8N271 834 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 KCNB2Q92953 911 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
SPARC-205ENST00000522348 IL25Q9H293 177 aa11.66□□□□□ -0.54
SPARC-205ENST00000522348 CCDC171Q6TFL3 1326 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 NPHP1O15259 732 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
SPARC-205ENST00000522348 ZKSCAN1P17029 563 aaPredicted RBP11.65□□□□□ -0.54
SPARC-205ENST00000522348 KCNJ4P48050 445 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
SPARC-205ENST00000522348 PTH1RQ03431 593 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 NFIXQ14938 502 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
SPARC-205ENST00000522348 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
SPARC-205ENST00000522348 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
SPARC-205ENST00000522348 C4BP0C0L5 1744 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 RIC1Q4ADV7 1423 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 A0A0D9SFI3 127 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 TAF5LO75529 589 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 GYS1P13807 737 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 PSMA5P28066 241 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 ARID4AP29374 1257 aaPredicted RBP11.64□□□□□ -0.55
SPARC-205ENST00000522348 TM4SF1P30408 202 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 CHRNDQ07001 517 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 ZMYM1Q5SVZ6 1142 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPARC-205ENST00000522348 ANKRD2Q9GZV1 360 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 CHMP5Q9NZZ3 219 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 CARMIL3Q8ND23 1372 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
SPARC-205ENST00000522348 ZAP70P43403 619 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 TSGA10IPQ3SY00 556 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 SLKQ9H2G2 1235 aaPredicted RBP11.63□□□□□ -0.55
SPARC-205ENST00000522348 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
SPARC-205ENST00000522348 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
SPARC-205ENST00000522348 MINPP1Q9UNW1 487 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms