RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
CPNE3-205ENST00000522240 APBB1O00213 710 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
CPNE3-205ENST00000522240 SGIP1Q9BQI5 828 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 SYT17Q9BSW7 474 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 ZNF609O15014 1411 aa16.1■□□□□ 0.17
CPNE3-205ENST00000522240 COL4A1P02462 1669 aa16.09■□□□□ 0.17
CPNE3-205ENST00000522240 SASH1O94885 1247 aa16.09■□□□□ 0.17
CPNE3-205ENST00000522240 IGHMBP2P38935 993 aaKnown RBP16.09■□□□□ 0.17
CPNE3-205ENST00000522240 CLASRPQ8N2M8 674 aaKnown RBP16.09■□□□□ 0.17
CPNE3-205ENST00000522240 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
CPNE3-205ENST00000522240 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
CPNE3-205ENST00000522240 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
CPNE3-205ENST00000522240 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
CPNE3-205ENST00000522240 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.17
CPNE3-205ENST00000522240 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
CPNE3-205ENST00000522240 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.16
CPNE3-205ENST00000522240 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
CPNE3-205ENST00000522240 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
CPNE3-205ENST00000522240 FHDC1Q9C0D6 1143 aaPredicted RBP16.08■□□□□ 0.16
CPNE3-205ENST00000522240 SEC31BQ9NQW1 1179 aa16.08■□□□□ 0.16
CPNE3-205ENST00000522240 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.16
CPNE3-205ENST00000522240 PDE6BP35913 854 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 RGS3P49796 1198 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 LRRC24Q50LG9 513 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 RPGRQ92834 1020 aaKnown RBP16.07■□□□□ 0.16
CPNE3-205ENST00000522240 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
CPNE3-205ENST00000522240 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 RIPOR2Q9Y4F9 1068 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 AOX1Q06278 1338 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 MROH5Q6ZUA9 1318 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 DLEC1Q9Y238 1755 aa16.07■□□□□ 0.16
CPNE3-205ENST00000522240 HOXA10P31260 410 aaPredicted RBP16.06■□□□□ 0.16
CPNE3-205ENST00000522240 TFCP2Q12800 502 aa16.06■□□□□ 0.16
CPNE3-205ENST00000522240 GRAPQ13588 217 aa16.06■□□□□ 0.16
CPNE3-205ENST00000522240 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
CPNE3-205ENST00000522240 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
CPNE3-205ENST00000522240 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
CPNE3-205ENST00000522240 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
CPNE3-205ENST00000522240 VGLL2Q8N8G2 317 aa16.05■□□□□ 0.16
CPNE3-205ENST00000522240 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
CPNE3-205ENST00000522240 RBM17Q96I25 401 aaKnown RBP16.05■□□□□ 0.16
CPNE3-205ENST00000522240 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
CPNE3-205ENST00000522240 BSDC1Q9NW68 430 aaPredicted RBP16.05■□□□□ 0.16
CPNE3-205ENST00000522240 CEP126Q9P2H0 1117 aa16.05■□□□□ 0.16
CPNE3-205ENST00000522240 TAF1P21675 1872 aa16.05■□□□□ 0.16
CPNE3-205ENST00000522240 MX1P20591 662 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
CPNE3-205ENST00000522240 TNNI3KQ59H18 835 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 METTL24Q5JXM2 366 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 CELF1Q92879 486 aaKnown RBP16.04■□□□□ 0.16
CPNE3-205ENST00000522240 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 STAP2Q9UGK3 403 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 AKAP2Q9Y2D5 859 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 FPGT-TNNI3KV9GXZ4 949 aa16.04■□□□□ 0.16
CPNE3-205ENST00000522240 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 IFIT2P09913 472 aaKnown RBP16.03■□□□□ 0.16
CPNE3-205ENST00000522240 NPR1P16066 1061 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 POLD1P28340 1107 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 AACSQ86V21 672 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 EAF2Q96CJ1 260 aaPredicted RBP16.03■□□□□ 0.16
CPNE3-205ENST00000522240 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
CPNE3-205ENST00000522240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.03■□□□□ 0.16
CPNE3-205ENST00000522240 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
CPNE3-205ENST00000522240 SRGNP10124 158 aa16.02■□□□□ 0.16
CPNE3-205ENST00000522240 PDE1AP54750 535 aa16.02■□□□□ 0.16
CPNE3-205ENST00000522240 C16orf71Q8IYS4 520 aaPredicted RBP16.02■□□□□ 0.16
CPNE3-205ENST00000522240 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.16
CPNE3-205ENST00000522240 CHD4Q14839 1912 aa16.02■□□□□ 0.15
CPNE3-205ENST00000522240 PDE8BO95263 885 aa16.01■□□□□ 0.15
CPNE3-205ENST00000522240 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
CPNE3-205ENST00000522240 ATP2B3Q16720 1220 aa16.01■□□□□ 0.15
CPNE3-205ENST00000522240 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
CPNE3-205ENST00000522240 LTBP1Q14766 1721 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 A0A1B0GUL7 405 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 BBOX1O75936 387 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
CPNE3-205ENST00000522240 CHRNDQ07001 517 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 STYK1Q6J9G0 422 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 MINPP1Q9UNW1 487 aa16■□□□□ 0.15
CPNE3-205ENST00000522240 H0YIN7 160 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 ERC2O15083 957 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 FGFR2P21802 821 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 C2CD5Q86YS7 1000 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 LPIN2Q92539 896 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
CPNE3-205ENST00000522240 TLR7Q9NYK1 1049 aaKnown RBP15.99■□□□□ 0.15
CPNE3-205ENST00000522240 DBNLQ9UJU6 430 aaKnown RBP15.99■□□□□ 0.15
CPNE3-205ENST00000522240 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
CPNE3-205ENST00000522240 CACNA1SQ13698 1873 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms