RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 TMEM87AQ8NBN3 555 aa8.27□□□□□ -1.09
CNOT8-220ENST00000522139 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
CNOT8-220ENST00000522139 LATS2Q9NRM7 1088 aa8.27□□□□□ -1.09
CNOT8-220ENST00000522139 TLR7Q9NYK1 1049 aaKnown RBP8.27□□□□□ -1.09
CNOT8-220ENST00000522139 GIPC1O14908 333 aa8.26□□□□□ -1.09
CNOT8-220ENST00000522139 PSAPP07602 524 aa8.26□□□□□ -1.09
CNOT8-220ENST00000522139 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
CNOT8-220ENST00000522139 EIF4BP23588 611 aaKnown RBP8.26□□□□□ -1.09
CNOT8-220ENST00000522139 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
CNOT8-220ENST00000522139 COL13A1Q5TAT6 717 aaPredicted RBP8.26□□□□□ -1.09
CNOT8-220ENST00000522139 GPR161Q8N6U8 529 aaKnown RBP8.26□□□□□ -1.09
CNOT8-220ENST00000522139 C12orf49Q9H741 205 aa8.26□□□□□ -1.09
CNOT8-220ENST00000522139 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
CNOT8-220ENST00000522139 MAP3K6O95382 1288 aa8.25□□□□□ -1.09
CNOT8-220ENST00000522139 CTSHP09668 335 aa8.25□□□□□ -1.09
CNOT8-220ENST00000522139 NXPE4Q6UWF7 544 aa8.25□□□□□ -1.09
CNOT8-220ENST00000522139 BCO2Q9BYV7 579 aa8.25□□□□□ -1.09
CNOT8-220ENST00000522139 SALL4Q9UJQ4 1053 aa8.25□□□□□ -1.09
CNOT8-220ENST00000522139 A0A1W2PP55 124 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 C2CD2LO14523 706 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 EDN3P14138 238 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 GRM2Q14416 872 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 PEAR1Q5VY43 1037 aaPredicted RBP8.24□□□□□ -1.09
CNOT8-220ENST00000522139 C9orf131Q5VYM1 1079 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
CNOT8-220ENST00000522139 NCAPG2Q86XI2 1143 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 NSUN5Q96P11 429 aaKnown RBP8.24□□□□□ -1.09
CNOT8-220ENST00000522139 COL25A1Q9BXS0 654 aaPredicted RBP8.24□□□□□ -1.09
CNOT8-220ENST00000522139 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
CNOT8-220ENST00000522139 ACPPP15309 386 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 SOX18P35713 384 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 HDLBPQ00341 1268 aaKnown RBP8.23□□□□□ -1.09
CNOT8-220ENST00000522139 PLAURQ03405 335 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 HYAL2Q12891 473 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 EHD4Q9H223 541 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
CNOT8-220ENST00000522139 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
CNOT8-220ENST00000522139 BMP4P12644 408 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 MLLT1Q03111 559 aaPredicted RBP8.22□□□□□ -1.09
CNOT8-220ENST00000522139 KIAA0319Q5VV43 1072 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 ZSCAN1Q8NBB4 408 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 STK17AQ9UEE5 414 aa8.22□□□□□ -1.09
CNOT8-220ENST00000522139 ZBTB42B2RXF5 422 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 KIF4AO95239 1232 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 USP17L7P0C7H9 530 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 KRT76Q01546 638 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.1
CNOT8-220ENST00000522139 GLIS3Q8NEA6 775 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 FAM8A1Q9UBU6 413 aa8.21□□□□□ -1.1
CNOT8-220ENST00000522139 FAM181BA6NEQ2 426 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 J3QW42 95 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 TRPA1O75762 1119 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 NRLP54845 237 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 PCBP4P57723 403 aaKnown RBP8.2□□□□□ -1.1
CNOT8-220ENST00000522139 FANCCQ00597 558 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 ZNF468Q5VIY5 522 aaPredicted RBP8.2□□□□□ -1.1
CNOT8-220ENST00000522139 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 CEP120Q8N960 986 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 OSMRQ99650 979 aa8.2□□□□□ -1.1
CNOT8-220ENST00000522139 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 MX2P20592 715 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 ZNF76P36508 570 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 SIK1P57059 783 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 GPLD1P80108 840 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 GAS6Q14393 721 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 RNFT1Q5M7Z0 435 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 TRPM4Q8TD43 1214 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 RNF34Q969K3 372 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
CNOT8-220ENST00000522139 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
CNOT8-220ENST00000522139 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 TRAK1Q9UPV9 953 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 USP31Q70CQ4 1352 aa8.19□□□□□ -1.1
CNOT8-220ENST00000522139 ERCC5P28715 1186 aaPredicted RBP8.18□□□□□ -1.1
CNOT8-220ENST00000522139 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
CNOT8-220ENST00000522139 TCF12Q99081 682 aa8.18□□□□□ -1.1
CNOT8-220ENST00000522139 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
CNOT8-220ENST00000522139 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
CNOT8-220ENST00000522139 FCGRTP55899 365 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 RAD51AP2Q09MP3 1159 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
CNOT8-220ENST00000522139 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
CNOT8-220ENST00000522139 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 SPACA7Q96KW9 195 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 KLF15Q9UIH9 416 aa8.17□□□□□ -1.1
CNOT8-220ENST00000522139 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms