RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
SYNPO-205ENST00000522122 CCDC102BQ68D86 513 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 MICU3Q86XE3 530 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 MKNK2Q9HBH9 465 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 DACT1Q9NYF0 836 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 SGSM2O43147 1006 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
SYNPO-205ENST00000522122 SPA17Q15506 151 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 CEP135Q66GS9 1140 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 KRT28Q7Z3Y7 464 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 CPLX3Q8WVH0 158 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 CENPHQ9H3R5 247 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 SNW1Q13573 536 aaKnown RBP15.94■□□□□ 0.14
SYNPO-205ENST00000522122 CREB3L3Q68CJ9 461 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 SMAP1Q8IYB5 467 aaPredicted RBP15.94■□□□□ 0.14
SYNPO-205ENST00000522122 GPTP24298 496 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 USP5P45974 858 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 PNMA6EA0A0J9YXQ4 647 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 METAP2P50579 478 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYNPO-205ENST00000522122 TAF4BQ92750 862 aa15.94■□□□□ 0.14
SYNPO-205ENST00000522122 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
SYNPO-205ENST00000522122 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
SYNPO-205ENST00000522122 JAKMIP3Q5VZ66 844 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 CCDC186Q7Z3E2 898 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 NUTM2AQ8IVF1 878 aaPredicted RBP15.93■□□□□ 0.14
SYNPO-205ENST00000522122 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 XAGE3Q8WTP9 111 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 LRRC2Q9BYS8 371 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 FKBP15Q5T1M5 1219 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
SYNPO-205ENST00000522122 CATIPQ7Z7H3 387 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 SIRT1Q96EB6 747 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
SYNPO-205ENST00000522122 KLF18A0A0U1RQI7 1052 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 MCMDC2Q4G0Z9 681 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 ISM2Q6H9L7 571 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 RAB11FIP4Q86YS3 637 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 CCDC150Q8NCX0 1101 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 SEC63Q9UGP8 760 aaKnown RBP15.92■□□□□ 0.14
SYNPO-205ENST00000522122 USP32Q8NFA0 1604 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 GOLGA6L9A6NEM1 432 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 ZFYP08048 801 aaPredicted RBP15.92■□□□□ 0.14
SYNPO-205ENST00000522122 NLRP5P59047 1200 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 CCDC144CPQ8IYA2 1237 aa15.92■□□□□ 0.14
SYNPO-205ENST00000522122 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 CCDC194A0A1B0GVG4 234 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 MAP9Q49MG5 647 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 ZSCAN29Q8IWY8 852 aaPredicted RBP15.91■□□□□ 0.14
SYNPO-205ENST00000522122 NUP88Q99567 741 aaPredicted RBP15.91■□□□□ 0.14
SYNPO-205ENST00000522122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
SYNPO-205ENST00000522122 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
SYNPO-205ENST00000522122 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 SYKP43405 635 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 KANK3Q6NY19 840 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 MYOM1P52179 1685 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 NCOA3Q9Y6Q9 1424 aa15.91■□□□□ 0.14
SYNPO-205ENST00000522122 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 YEATS4O95619 227 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 PTGS1P23219 599 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 Q6ZUG5 572 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 PALD1Q9ULE6 856 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 SKILP12757 684 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 HOXC9P31274 260 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 SLC26A6Q9BXS9 759 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 SPDYE4A6NLX3 237 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 ZNF444Q8N0Y2 327 aaPredicted RBP15.9■□□□□ 0.14
SYNPO-205ENST00000522122 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
SYNPO-205ENST00000522122 ZNF76P36508 570 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 CACNA2D4Q7Z3S7 1137 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 SEPT11Q9NVA2 429 aaKnown RBP15.89■□□□□ 0.13
SYNPO-205ENST00000522122 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 HOXB7P09629 217 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 STAP2Q9UGK3 403 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 MCM3P25205 808 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 CUL4AQ13619 759 aa15.89■□□□□ 0.13
SYNPO-205ENST00000522122 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
SYNPO-205ENST00000522122 KIF2CQ99661 725 aa15.88■□□□□ 0.13
SYNPO-205ENST00000522122 CAMSAP1Q5T5Y3 1602 aa15.88■□□□□ 0.13
SYNPO-205ENST00000522122 POLR3GO15318 223 aaPredicted RBP15.88■□□□□ 0.13
SYNPO-205ENST00000522122 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
SYNPO-205ENST00000522122 FGFR1OPO95684 399 aaKnown RBP15.88■□□□□ 0.13
SYNPO-205ENST00000522122 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
SYNPO-205ENST00000522122 UBASH3AP57075 661 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms