RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GORABQ5T7V8 394 aa22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 MYH3P11055 1940 aa22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 FAM177BA6PVY3 158 aa22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 CREB3L3Q68CJ9 461 aa22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 ZGPATQ8N5A5 531 aaKnown RBP22.21■■□□□ 1.15
TRAPPC9-210ENST00000521667 NTSR2O95665 410 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 HCLS1P14317 486 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 ADORA1P30542 326 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 NUCB2P80303 420 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 ATP2B3Q16720 1220 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 TTC39AQ5SRH9 613 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 ZNF772Q68DY9 489 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 CLEC4GQ6UXB4 293 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 TTC14Q96N46 770 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 TM6SF1Q9BZW5 370 aa22.2■■□□□ 1.14
TRAPPC9-210ENST00000521667 TAF5LO75529 589 aa22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 HSP90B1P14625 803 aaKnown RBP22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 NOL8Q76FK4 1167 aaKnown RBP22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 CASTP20810 708 aaKnown RBP22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 MCMDC2Q4G0Z9 681 aa22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
TRAPPC9-210ENST00000521667 SSFA2P28290 1259 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 RNF20Q5VTR2 975 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 KRT27Q7Z3Y8 459 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 INTS4Q96HW7 963 aaKnown RBP22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 JAKMIP1Q96N16 626 aaKnown RBP22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 LRP5O75197 1615 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 ABCC12Q96J65 1359 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 SLC27A2O14975 620 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 ADCK5Q3MIX3 580 aa22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 RC3H1Q5TC82 1133 aaKnown RBP22.18■■□□□ 1.14
TRAPPC9-210ENST00000521667 BCORQ6W2J9 1755 aa22.17■■□□□ 1.14
TRAPPC9-210ENST00000521667 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
TRAPPC9-210ENST00000521667 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
TRAPPC9-210ENST00000521667 CHGBP05060 677 aa22.17■■□□□ 1.14
TRAPPC9-210ENST00000521667 ZSWIM6Q9HCJ5 1215 aa22.17■■□□□ 1.14
TRAPPC9-210ENST00000521667 RGL2O15211 777 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 PDE8BO95263 885 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 RBM6P78332 1123 aaKnown RBP22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 SEC62Q99442 399 aaKnown RBP22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 HELLSQ9NRZ9 838 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 AK2P54819 239 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 GSE1Q14687 1217 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 MROH5Q6ZUA9 1318 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 HMG20BQ9P0W2 317 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 CYP46A1Q9Y6A2 500 aa22.16■■□□□ 1.14
TRAPPC9-210ENST00000521667 CYP2E1P05181 493 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 FKBP4Q02790 459 aaKnown RBP eCLIP22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 CCDC152Q4G0S7 254 aa22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 VPS53Q5VIR6 699 aa22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 CCDC129Q6ZRS4 1044 aa22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 RPAP1Q9BWH6 1393 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC9-210ENST00000521667 SMIM5Q71RC9 77 aa22.14■■□□□ 1.14
TRAPPC9-210ENST00000521667 CCNL1Q9UK58 526 aaPredicted RBP22.14■■□□□ 1.14
TRAPPC9-210ENST00000521667 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 CPA1P15085 419 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 PSMA5P28066 241 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZMYM1Q5SVZ6 1142 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 CLEC17AQ6ZS10 378 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 RUFY3Q7L099 469 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 FBXO41Q8TF61 875 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 LIMCH1Q9UPQ0 1083 aa22.14■■□□□ 1.13
TRAPPC9-210ENST00000521667 DDX60Q8IY21 1712 aaKnown RBP22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 LRRFIP1Q32MZ4 808 aaKnown RBP22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 TSGA10IPQ3SY00 556 aa22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 U3KPZ7 1027 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 SCARF1Q14162 830 aa22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZNF512BQ96KM6 892 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 MPHOSPH8Q99549 860 aa22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC9-210ENST00000521667 LAMB2P55268 1798 aa22.12■■□□□ 1.13
TRAPPC9-210ENST00000521667 LY75O60449 1722 aa22.12■■□□□ 1.13
TRAPPC9-210ENST00000521667 PKP1Q13835 747 aa22.12■■□□□ 1.13
TRAPPC9-210ENST00000521667 PUM3Q15397 648 aaKnown RBP22.12■■□□□ 1.13
TRAPPC9-210ENST00000521667 SEC31BQ9NQW1 1179 aa22.12■■□□□ 1.13
TRAPPC9-210ENST00000521667 FAM196AQ6ZSG2 479 aa22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 RGS17Q9UGC6 210 aaPredicted RBP22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 TRIM37O94972 964 aa22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZAP70P43403 619 aa22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 LPIN2Q92539 896 aa22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
TRAPPC9-210ENST00000521667 SCN7AQ01118 1682 aa22.1■■□□□ 1.13
TRAPPC9-210ENST00000521667 GNPATO15228 680 aa22.1■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZFYP08048 801 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC9-210ENST00000521667 FGFR2P21802 821 aa22.1■■□□□ 1.13
TRAPPC9-210ENST00000521667 SLFNL1Q499Z3 407 aa22.1■■□□□ 1.13
TRAPPC9-210ENST00000521667 IGHMBP2P38935 993 aaKnown RBP22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 KRT32Q14532 448 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 BCL2L12Q9HB09 334 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 MAST3O60307 1309 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 PTMSP20962 102 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 RXRBP28702 533 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 MCAMP43121 646 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 ERFEQ4G0M1 354 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 BLOC1S2Q6QNY1 142 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms