RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SCNN1DP51172 638 aa14.72□□□□□ -0.05
CSMD1-210ENST00000521646 ZNF34Q8IZ26 560 aa14.72□□□□□ -0.05
CSMD1-210ENST00000521646 ERVV-1B6SEH8 477 aa14.71□□□□□ -0.05
CSMD1-210ENST00000521646 DPYSL4O14531 572 aa14.71□□□□□ -0.05
CSMD1-210ENST00000521646 HOXA10P31260 410 aaPredicted RBP14.71□□□□□ -0.05
CSMD1-210ENST00000521646 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
CSMD1-210ENST00000521646 PSMD1Q99460 953 aa14.71□□□□□ -0.05
CSMD1-210ENST00000521646 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
CSMD1-210ENST00000521646 HACL1Q9UJ83 578 aa14.71□□□□□ -0.05
CSMD1-210ENST00000521646 IQCA1LA6NCM1 817 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
CSMD1-210ENST00000521646 EPS15P42566 896 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 NFE2L2Q16236 605 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 THSD7BQ9C0I4 1608 aa14.7□□□□□ -0.06
CSMD1-210ENST00000521646 TMEM88BA6NKF7 163 aa14.69□□□□□ -0.06
CSMD1-210ENST00000521646 PSEN2P49810 448 aa14.69□□□□□ -0.06
CSMD1-210ENST00000521646 FOSBP53539 338 aa14.69□□□□□ -0.06
CSMD1-210ENST00000521646 KRT24Q2M2I5 525 aa14.69□□□□□ -0.06
CSMD1-210ENST00000521646 CNTROBQ8N137 903 aa14.69□□□□□ -0.06
CSMD1-210ENST00000521646 IBTKQ9P2D0 1353 aaPredicted RBP14.69□□□□□ -0.06
CSMD1-210ENST00000521646 DUOX1Q9NRD9 1551 aa14.68□□□□□ -0.06
CSMD1-210ENST00000521646 TRAF5O00463 557 aa14.68□□□□□ -0.06
CSMD1-210ENST00000521646 GPC2Q8N158 579 aa14.68□□□□□ -0.06
CSMD1-210ENST00000521646 WBP1LQ9NX94 342 aa14.68□□□□□ -0.06
CSMD1-210ENST00000521646 RASSF10A6NK89 507 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 ALDH1B1P30837 517 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 E2F4Q16254 413 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 CST9Q5W186 159 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 GIGYF2Q6Y7W6 1299 aaKnown RBP14.67□□□□□ -0.06
CSMD1-210ENST00000521646 GJA3Q9Y6H8 435 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 ANKRD36CQ5JPF3 1778 aa14.67□□□□□ -0.06
CSMD1-210ENST00000521646 SHTN1A0MZ66 631 aa14.66□□□□□ -0.06
CSMD1-210ENST00000521646 LBX1P52954 281 aa14.66□□□□□ -0.06
CSMD1-210ENST00000521646 KCNK17Q96T54 332 aa14.66□□□□□ -0.06
CSMD1-210ENST00000521646 ABCC4O15439 1325 aa14.66□□□□□ -0.06
CSMD1-210ENST00000521646 PPEF1O14829 653 aaPredicted RBP14.65□□□□□ -0.06
CSMD1-210ENST00000521646 HSPA8P11142 646 aaKnown RBP14.65□□□□□ -0.06
CSMD1-210ENST00000521646 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
CSMD1-210ENST00000521646 AOC3Q16853 763 aa14.65□□□□□ -0.06
CSMD1-210ENST00000521646 DLK2Q6UY11 383 aa14.65□□□□□ -0.06
CSMD1-210ENST00000521646 CRAMP1Q96RY5 1269 aa14.65□□□□□ -0.06
CSMD1-210ENST00000521646 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSMD1-210ENST00000521646 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
CSMD1-210ENST00000521646 DMRTA1Q5VZB9 504 aa14.64□□□□□ -0.07
CSMD1-210ENST00000521646 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
CSMD1-210ENST00000521646 NECTIN2Q92692 538 aa14.64□□□□□ -0.07
CSMD1-210ENST00000521646 ZDHHC16Q969W1 377 aa14.64□□□□□ -0.07
CSMD1-210ENST00000521646 NYXQ9GZU5 481 aa14.64□□□□□ -0.07
CSMD1-210ENST00000521646 EIF2S2P20042 333 aaKnown RBP14.63□□□□□ -0.07
CSMD1-210ENST00000521646 SLC10A5Q5PT55 438 aa14.63□□□□□ -0.07
CSMD1-210ENST00000521646 LARGE2Q8N3Y3 721 aa14.63□□□□□ -0.07
CSMD1-210ENST00000521646 PNISRQ8TF01 805 aaKnown RBP14.63□□□□□ -0.07
CSMD1-210ENST00000521646 RPGRQ92834 1020 aaKnown RBP14.63□□□□□ -0.07
CSMD1-210ENST00000521646 PRDM10Q9NQV6 1147 aa14.63□□□□□ -0.07
CSMD1-210ENST00000521646 TRPM7Q96QT4 1865 aa14.63□□□□□ -0.07
CSMD1-210ENST00000521646 WDR33Q9C0J8 1336 aaKnown RBP14.63□□□□□ -0.07
CSMD1-210ENST00000521646 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 YDJCA8MPS7 323 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 HCLS1P14317 486 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-210ENST00000521646 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-210ENST00000521646 CXCL9Q07325 125 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
CSMD1-210ENST00000521646 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
CSMD1-210ENST00000521646 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
CSMD1-210ENST00000521646 NLRP10Q86W26 655 aa14.61□□□□□ -0.07
CSMD1-210ENST00000521646 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
CSMD1-210ENST00000521646 JDP2Q8WYK2 163 aa14.61□□□□□ -0.07
CSMD1-210ENST00000521646 RBM17Q96I25 401 aaKnown RBP14.61□□□□□ -0.07
CSMD1-210ENST00000521646 RTFDC1Q9BY42 306 aaPredicted RBP14.61□□□□□ -0.07
CSMD1-210ENST00000521646 ERBB4Q15303 1308 aa14.61□□□□□ -0.07
CSMD1-210ENST00000521646 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 AOC2O75106 756 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 PTPREP23469 700 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
CSMD1-210ENST00000521646 CTCFP49711 727 aaPredicted RBP14.6□□□□□ -0.07
CSMD1-210ENST00000521646 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
CSMD1-210ENST00000521646 RIPK4P57078 832 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 CC2D2BQ6DHV5 1058 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 ADGRD1Q6QNK2 874 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 COPS6Q7L5N1 327 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 RNF166Q96A37 237 aaPredicted RBP14.6□□□□□ -0.07
CSMD1-210ENST00000521646 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 TSKSQ9UJT2 592 aa14.6□□□□□ -0.07
CSMD1-210ENST00000521646 EGFRP00533 1210 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 GMPSP49915 693 aaPredicted RBP14.59□□□□□ -0.07
CSMD1-210ENST00000521646 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
CSMD1-210ENST00000521646 CCDC146Q8IYE0 955 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 TRPM4Q8TD43 1214 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 ZIC5Q96T25 663 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
CSMD1-210ENST00000521646 ADAM33Q9BZ11 813 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 GLIS2Q9BZE0 524 aaPredicted RBP14.59□□□□□ -0.07
CSMD1-210ENST00000521646 ABT1Q9ULW3 272 aaKnown RBP14.59□□□□□ -0.07
CSMD1-210ENST00000521646 PCDHGA10Q9Y5H3 936 aa14.59□□□□□ -0.07
CSMD1-210ENST00000521646 PARP10Q53GL7 1025 aa14.58□□□□□ -0.08
CSMD1-210ENST00000521646 NIM1KQ8IY84 436 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms