RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 HDAC5Q9UQL6 1122 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 LAMB4A4D0S4 1761 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 MEGF6O75095 1541 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 BTBD11A6QL63 1104 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 CCNYL3P0C7X3 344 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 RPIAP49247 311 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 FKBP5Q13451 457 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 PTPRNQ16849 979 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 ZNF598Q86UK7 904 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-228ENST00000521640 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 COL22A1Q8NFW1 1626 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 ANKRD45Q5TZF3 282 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 G2E3Q7L622 706 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 MEIS3Q99687 375 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 LNPKQ9C0E8 428 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 OSBPL3Q9H4L5 887 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 MIS18AQ9NYP9 233 aa8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-228ENST00000521640 WDR17Q8IZU2 1322 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 PAPPAQ13219 1627 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 AHDC1Q5TGY3 1603 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 GIGYF1O75420 1035 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 ALDH1L1O75891 902 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 PHKG2P15735 406 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 HSPA2P54652 639 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 TRIM32Q13049 653 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 IFNL2Q8IZJ0 200 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 DCAF5Q96JK2 942 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 C1orf115Q9H7X2 142 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 LGR6Q9HBX8 967 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 AOX1Q06278 1338 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
CTNNA1-228ENST00000521640 UBR2Q8IWV8 1755 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 PLCH1Q4KWH8 1693 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 CDC45O75419 566 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 ZC3H6P61129 1189 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 ATP8B2P98198 1209 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 MTX1Q13505 466 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 SRCIN1Q9C0H9 1055 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 SLC52A2Q9HAB3 445 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 TUBGCP6Q96RT7 1819 aa8.28□□□□□ -1.08
CTNNA1-228ENST00000521640 GLI3P10071 1580 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 COL15A1P39059 1388 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 ZBTB7CA1YPR0 619 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 UBTFL1P0CB47 393 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 SKOR1P84550 965 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 HSP90AB4PQ58FF6 505 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 TTC22Q5TAA0 569 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 SLC4A10Q6U841 1118 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 SSH3Q8TE77 659 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 DNAAF4Q8WXU2 420 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 C22orf23Q9BZE7 217 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 DDX21Q9NR30 783 aaKnown RBP eCLIP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 PKD2L1Q9P0L9 805 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 COL14A1Q05707 1796 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 C5P01031 1676 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 UTYO14607 1347 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 SALL3Q9BXA9 1300 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 PCDH11XQ9BZA7 1347 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 PCDH11YQ9BZA8 1340 aa8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 ZNF335Q9H4Z2 1342 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-228ENST00000521640 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 ADCY9O60503 1353 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 LRP6O75581 1613 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 F6X3S4 739 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 EPB41L2O43491 1005 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 GDF9O60383 454 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 CD2BP2O95400 341 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 RFC5P40937 340 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 BEND3Q5T5X7 828 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 ZNF790Q6PG37 636 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 CARD10Q9BWT7 1032 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 USP44Q9H0E7 712 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 CHPF2Q9P2E5 772 aa8.26□□□□□ -1.09
CTNNA1-228ENST00000521640 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms