RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 ZC3H12CQ9C0D7 883 aaKnown RBP17.64■□□□□ 0.41
SPARC-203ENST00000521327 HYPKQ9NX55 129 aa17.64■□□□□ 0.41
SPARC-203ENST00000521327 HOXB7P09629 217 aa17.63■□□□□ 0.41
SPARC-203ENST00000521327 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
SPARC-203ENST00000521327 G3V3G9 751 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 VIL1P09327 827 aaKnown RBP17.62■□□□□ 0.41
SPARC-203ENST00000521327 KIF4BQ2VIQ3 1234 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 RUNDC1Q96C34 613 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
SPARC-203ENST00000521327 TRPA1O75762 1119 aa17.61■□□□□ 0.41
SPARC-203ENST00000521327 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
SPARC-203ENST00000521327 RNF186Q9NXI6 227 aa17.61■□□□□ 0.41
SPARC-203ENST00000521327 GGA3Q9NZ52 723 aa17.61■□□□□ 0.41
SPARC-203ENST00000521327 ANKIB1Q9P2G1 1089 aa17.61■□□□□ 0.41
SPARC-203ENST00000521327 ASTN2O75129 1339 aaPredicted RBP17.61■□□□□ 0.41
SPARC-203ENST00000521327 UFL1O94874 794 aa17.6■□□□□ 0.41
SPARC-203ENST00000521327 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
SPARC-203ENST00000521327 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
SPARC-203ENST00000521327 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
SPARC-203ENST00000521327 ANKRD36CQ5JPF3 1778 aa17.59■□□□□ 0.41
SPARC-203ENST00000521327 WDR43Q15061 677 aaKnown RBP eCLIP17.59■□□□□ 0.41
SPARC-203ENST00000521327 CDCA5Q96FF9 252 aa17.59■□□□□ 0.41
SPARC-203ENST00000521327 CSRNP1Q96S65 589 aa17.59■□□□□ 0.41
SPARC-203ENST00000521327 GGA1Q9UJY5 639 aa17.59■□□□□ 0.41
SPARC-203ENST00000521327 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
SPARC-203ENST00000521327 LAMB2P55268 1798 aa17.58■□□□□ 0.41
SPARC-203ENST00000521327 GOLGA2Q08379 1002 aa17.58■□□□□ 0.4
SPARC-203ENST00000521327 SCARF1Q14162 830 aa17.58■□□□□ 0.4
SPARC-203ENST00000521327 ANGEL2Q5VTE6 544 aaKnown RBP17.58■□□□□ 0.4
SPARC-203ENST00000521327 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.4
SPARC-203ENST00000521327 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
SPARC-203ENST00000521327 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.4
SPARC-203ENST00000521327 MBIPQ9NS73 344 aa17.58■□□□□ 0.4
SPARC-203ENST00000521327 CASP8AP2Q9UKL3 1982 aa17.57■□□□□ 0.4
SPARC-203ENST00000521327 TAF1P21675 1872 aa17.57■□□□□ 0.4
SPARC-203ENST00000521327 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
SPARC-203ENST00000521327 SLC10A3P09131 477 aa17.57■□□□□ 0.4
SPARC-203ENST00000521327 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
SPARC-203ENST00000521327 ZNF280AP59817 542 aaPredicted RBP17.57■□□□□ 0.4
SPARC-203ENST00000521327 RSBN1LQ6PCB5 846 aaPredicted RBP17.57■□□□□ 0.4
SPARC-203ENST00000521327 MYD88Q99836 296 aa17.57■□□□□ 0.4
SPARC-203ENST00000521327 COL4A1P02462 1669 aa17.57■□□□□ 0.4
SPARC-203ENST00000521327 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
SPARC-203ENST00000521327 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
SPARC-203ENST00000521327 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
SPARC-203ENST00000521327 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
SPARC-203ENST00000521327 SOX10P56693 466 aa17.55■□□□□ 0.4
SPARC-203ENST00000521327 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
SPARC-203ENST00000521327 PDE8AO60658 829 aa17.54■□□□□ 0.4
SPARC-203ENST00000521327 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
SPARC-203ENST00000521327 USP17L8P0C7I0 530 aa17.54■□□□□ 0.4
SPARC-203ENST00000521327 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
SPARC-203ENST00000521327 MYOZ2Q9NPC6 264 aa17.54■□□□□ 0.4
SPARC-203ENST00000521327 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
SPARC-203ENST00000521327 RASAL3Q86YV0 1011 aa17.53■□□□□ 0.4
SPARC-203ENST00000521327 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
SPARC-203ENST00000521327 GMLQ99445 158 aa17.53■□□□□ 0.4
SPARC-203ENST00000521327 CWC25Q9NXE8 425 aaPredicted RBP17.53■□□□□ 0.4
SPARC-203ENST00000521327 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
SPARC-203ENST00000521327 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.4
SPARC-203ENST00000521327 XDHP47989 1333 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 USP17L3A6NCW0 530 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 USP17L4A6NCW7 530 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 FKBP1BP68106 108 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 USP17L1Q7RTZ2 530 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 PODNQ7Z5L7 613 aa17.52■□□□□ 0.4
SPARC-203ENST00000521327 CTU1Q7Z7A3 348 aaKnown RBP17.52■□□□□ 0.4
SPARC-203ENST00000521327 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
SPARC-203ENST00000521327 WTIPA6NIX2 430 aaPredicted RBP17.51■□□□□ 0.39
SPARC-203ENST00000521327 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
SPARC-203ENST00000521327 PRAMEF18Q5VWM3 479 aa17.51■□□□□ 0.39
SPARC-203ENST00000521327 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
SPARC-203ENST00000521327 IFT57Q9NWB7 429 aa17.51■□□□□ 0.39
SPARC-203ENST00000521327 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
SPARC-203ENST00000521327 GNAI1P63096 354 aa17.5■□□□□ 0.39
SPARC-203ENST00000521327 C8orf58Q8NAV2 365 aa17.5■□□□□ 0.39
SPARC-203ENST00000521327 PITPNM2Q9BZ72 1349 aa17.49■□□□□ 0.39
SPARC-203ENST00000521327 APAF1O14727 1248 aa17.49■□□□□ 0.39
SPARC-203ENST00000521327 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
SPARC-203ENST00000521327 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
SPARC-203ENST00000521327 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
SPARC-203ENST00000521327 ZNF609O15014 1411 aa17.48■□□□□ 0.39
SPARC-203ENST00000521327 TTLL12Q14166 644 aaPredicted RBP17.48■□□□□ 0.39
SPARC-203ENST00000521327 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
SPARC-203ENST00000521327 MINPP1Q9UNW1 487 aa17.48■□□□□ 0.39
SPARC-203ENST00000521327 MAP3K2Q9Y2U5 619 aa17.48■□□□□ 0.39
SPARC-203ENST00000521327 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 CTSWP56202 376 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
SPARC-203ENST00000521327 CCDC30Q5VVM6 783 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 OGFOD1Q8N543 542 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 TTLL11Q8NHH1 800 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
SPARC-203ENST00000521327 HDAC9Q9UKV0 1011 aa17.47■□□□□ 0.39
SPARC-203ENST00000521327 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms