RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 JARID2Q92833 1246 aaPredicted RBP13.72□□□□□ -0.21
PVT1-209ENST00000520913 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
PVT1-209ENST00000520913 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 XDHP47989 1333 aa13.71□□□□□ -0.21
PVT1-209ENST00000520913 ECE2O60344 883 aa13.71□□□□□ -0.21
PVT1-209ENST00000520913 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
PVT1-209ENST00000520913 ANKIB1Q9P2G1 1089 aa13.71□□□□□ -0.21
PVT1-209ENST00000520913 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.21
PVT1-209ENST00000520913 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
PVT1-209ENST00000520913 ZNF609O15014 1411 aa13.71□□□□□ -0.22
PVT1-209ENST00000520913 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
PVT1-209ENST00000520913 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
PVT1-209ENST00000520913 GCKRQ14397 625 aa13.7□□□□□ -0.22
PVT1-209ENST00000520913 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
PVT1-209ENST00000520913 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
PVT1-209ENST00000520913 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
PVT1-209ENST00000520913 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
PVT1-209ENST00000520913 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
PVT1-209ENST00000520913 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
PVT1-209ENST00000520913 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
PVT1-209ENST00000520913 H7C1W4 665 aa13.69□□□□□ -0.22
PVT1-209ENST00000520913 PSMD14O00487 310 aa13.69□□□□□ -0.22
PVT1-209ENST00000520913 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
PVT1-209ENST00000520913 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
PVT1-209ENST00000520913 GREM2Q9H772 168 aa13.69□□□□□ -0.22
PVT1-209ENST00000520913 MED23Q9ULK4 1368 aa13.69□□□□□ -0.22
PVT1-209ENST00000520913 G3V3G9 751 aa13.68□□□□□ -0.22
PVT1-209ENST00000520913 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
PVT1-209ENST00000520913 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
PVT1-209ENST00000520913 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
PVT1-209ENST00000520913 DPF2Q92785 391 aa13.68□□□□□ -0.22
PVT1-209ENST00000520913 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
PVT1-209ENST00000520913 CNOT7Q9UIV1 285 aaKnown RBP13.68□□□□□ -0.22
PVT1-209ENST00000520913 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 H7C1D1 291 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
PVT1-209ENST00000520913 CASP7P55210 303 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 TRPM4Q8TD43 1214 aa13.67□□□□□ -0.22
PVT1-209ENST00000520913 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
PVT1-209ENST00000520913 BSDC1Q9NW68 430 aaPredicted RBP13.67□□□□□ -0.22
PVT1-209ENST00000520913 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
PVT1-209ENST00000520913 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
PVT1-209ENST00000520913 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
PVT1-209ENST00000520913 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
PVT1-209ENST00000520913 SHTN1A0MZ66 631 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 F6X3S4 739 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 TRAF5O00463 557 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 ITGA6P23229 1130 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 DEFB115Q30KQ5 88 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 MINPP1Q9UNW1 487 aa13.65□□□□□ -0.22
PVT1-209ENST00000520913 CSF1RP07333 972 aa13.64□□□□□ -0.23
PVT1-209ENST00000520913 VIL1P09327 827 aaKnown RBP13.64□□□□□ -0.23
PVT1-209ENST00000520913 VEGFBP49765 207 aa13.64□□□□□ -0.23
PVT1-209ENST00000520913 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
PVT1-209ENST00000520913 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
PVT1-209ENST00000520913 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
PVT1-209ENST00000520913 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
PVT1-209ENST00000520913 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
PVT1-209ENST00000520913 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
PVT1-209ENST00000520913 E9PSI1 815 aa13.63□□□□□ -0.23
PVT1-209ENST00000520913 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
PVT1-209ENST00000520913 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
PVT1-209ENST00000520913 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
PVT1-209ENST00000520913 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
PVT1-209ENST00000520913 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 GRM8O00222 908 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 CELF2O95319 508 aaKnown RBP13.62□□□□□ -0.23
PVT1-209ENST00000520913 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
PVT1-209ENST00000520913 SAMD7Q7Z3H4 446 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 TLL2Q9Y6L7 1015 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
PVT1-209ENST00000520913 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
PVT1-209ENST00000520913 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 ALDH1L1O75891 902 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 EGFRP00533 1210 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 ECE1P42892 770 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
PVT1-209ENST00000520913 CST9Q5W186 159 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
PVT1-209ENST00000520913 AIDAQ96BJ3 306 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 MYO3BQ8WXR4 1341 aa13.61□□□□□ -0.23
PVT1-209ENST00000520913 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 FOXO4P98177 505 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
PVT1-209ENST00000520913 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms