RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 IQCB1Q15051 598 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 SASH1O94885 1247 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 CHGBP05060 677 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 ZFP91Q96JP5 570 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 ROBO2Q9HCK4 1378 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 PTPN21Q16825 1174 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 GOLPH3LQ9H4A5 285 aa14.93□□□□□ -0.02
TRAPPC9-208ENST00000520857 SCRN1Q12765 414 aa14.92□□□□□ -0.02
TRAPPC9-208ENST00000520857 STK11IPQ8N1F8 1099 aa14.92□□□□□ -0.02
TRAPPC9-208ENST00000520857 AMOTL2Q9Y2J4 779 aa14.92□□□□□ -0.02
TRAPPC9-208ENST00000520857 TAF5LO75529 589 aa14.92□□□□□ -0.02
TRAPPC9-208ENST00000520857 CDC25BP30305 580 aa14.92□□□□□ -0.02
TRAPPC9-208ENST00000520857 ALDH1L1O75891 902 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 ZSWIM4Q9H7M6 989 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 GPS2Q13227 327 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 CCDC150Q8NCX0 1101 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 CCDC34Q96HJ3 373 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 MYD88Q99836 296 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 USP6P35125 1406 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
TRAPPC9-208ENST00000520857 CCZ1BP86790 482 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 CCZ1P86791 482 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 DPCR1Q3MIW9 517 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 GOLIM4O00461 696 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 LINS1Q8NG48 757 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 PPP1R13BQ96KQ4 1090 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 CARD6Q9BX69 1037 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 HAND2P61296 217 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 RBM6P78332 1123 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 WASHC4Q2M389 1173 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 NEK11Q8NG66 645 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 UTP14AQ9BVJ6 771 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRAPPC9-208ENST00000520857 CYP21A2P08686 494 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 CLCN6P51797 869 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 SARM1Q6SZW1 724 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 GOLGA8FQ08AF8 430 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 GOLGA8DPQ0D2H9 430 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 TFCP2Q12800 502 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 NYAP1Q6ZVC0 841 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
TRAPPC9-208ENST00000520857 SEC31AO94979 1220 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 UBASH3AP57075 661 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 GNG11P61952 73 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 SLFNL1Q499Z3 407 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 DHX32Q7L7V1 743 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 UBE3BQ7Z3V4 1068 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 DHX40Q8IX18 779 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 DBNDD2Q9BQY9 259 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 RCOR1Q9UKL0 485 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 PCDHA7Q9UN72 937 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 NDUFA8P51970 172 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 RBM43Q6ZSC3 357 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
TRAPPC9-208ENST00000520857 ATP5J2-PTCD1G3V325 749 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 CCP110O43303 1012 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 PTCD1O75127 700 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 GTF2E1P29083 439 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 TTLL5Q6EMB2 1281 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 EVCP57679 992 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 EPC1Q9H2F5 836 aa14.87□□□□□ -0.03
TRAPPC9-208ENST00000520857 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 SPTLC2O15270 562 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 HMGB1P09429 215 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 CLTCQ00610 1675 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 E4F1Q66K89 784 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 USP42Q9H9J4 1324 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 KIAA1468Q9P260 1216 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 ORC3Q9UBD5 711 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 FANCCQ00597 558 aa14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 ZNF330Q9Y3S2 320 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-208ENST00000520857 DIP2CQ9Y2E4 1556 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms