RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TWISTNBQ3B726 338 aaPredicted RBP25.26■■□□□ 1.63
PABPC1-215ENST00000520804 GLIS2Q9BZE0 524 aaPredicted RBP25.26■■□□□ 1.63
PABPC1-215ENST00000520804 IL16Q14005 1332 aa25.26■■□□□ 1.63
PABPC1-215ENST00000520804 CTCFP49711 727 aaPredicted RBP25.25■■□□□ 1.63
PABPC1-215ENST00000520804 CCDC85AQ96PX6 553 aaPredicted RBP25.25■■□□□ 1.63
PABPC1-215ENST00000520804 ZC3H12CQ9C0D7 883 aaKnown RBP25.25■■□□□ 1.63
PABPC1-215ENST00000520804 MRS2Q9HD23 443 aa25.25■■□□□ 1.63
PABPC1-215ENST00000520804 PRDM10Q9NQV6 1147 aa25.25■■□□□ 1.63
PABPC1-215ENST00000520804 TLL2Q9Y6L7 1015 aa25.25■■□□□ 1.63
PABPC1-215ENST00000520804 RTL9Q8NET4 1388 aa25.24■■□□□ 1.63
PABPC1-215ENST00000520804 KCNQ5Q9NR82 932 aa25.24■■□□□ 1.63
PABPC1-215ENST00000520804 ANKIB1Q9P2G1 1089 aa25.24■■□□□ 1.63
PABPC1-215ENST00000520804 THSD7BQ9C0I4 1608 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 UFL1O94874 794 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 RPS12P25398 132 aaKnown RBP25.23■■□□□ 1.63
PABPC1-215ENST00000520804 ECE1P42892 770 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 MAP2K1Q02750 393 aaPredicted RBP25.23■■□□□ 1.63
PABPC1-215ENST00000520804 NEXNQ0ZGT2 675 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 CDC37L1Q7L3B6 337 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 CAPNS2Q96L46 248 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 GGA1Q9UJY5 639 aa25.23■■□□□ 1.63
PABPC1-215ENST00000520804 CAPN15O75808 1086 aa25.22■■□□□ 1.63
PABPC1-215ENST00000520804 CELF2O95319 508 aaKnown RBP25.22■■□□□ 1.63
PABPC1-215ENST00000520804 CYP4F22Q6NT55 531 aa25.22■■□□□ 1.63
PABPC1-215ENST00000520804 PAXIP1Q6ZW49 1069 aaPredicted RBP25.22■■□□□ 1.63
PABPC1-215ENST00000520804 G2E3Q7L622 706 aa25.22■■□□□ 1.63
PABPC1-215ENST00000520804 ANKRD18AQ8IVF6 992 aa25.22■■□□□ 1.63
PABPC1-215ENST00000520804 ANP32CO43423 234 aa25.21■■□□□ 1.63
PABPC1-215ENST00000520804 SLC4A2P04920 1241 aa25.21■■□□□ 1.63
PABPC1-215ENST00000520804 CTSWP56202 376 aa25.21■■□□□ 1.63
PABPC1-215ENST00000520804 SAMD7Q7Z3H4 446 aa25.21■■□□□ 1.63
PABPC1-215ENST00000520804 NEURL1BA8MQ27 555 aa25.2■■□□□ 1.62
PABPC1-215ENST00000520804 CWF19L2Q2TBE0 894 aaKnown RBP25.2■■□□□ 1.62
PABPC1-215ENST00000520804 SAPCD2Q86UD0 394 aa25.2■■□□□ 1.62
PABPC1-215ENST00000520804 SCN9AQ15858 1988 aa25.2■■□□□ 1.62
PABPC1-215ENST00000520804 XDHP47989 1333 aa25.19■■□□□ 1.62
PABPC1-215ENST00000520804 VIL1P09327 827 aaKnown RBP25.19■■□□□ 1.62
PABPC1-215ENST00000520804 TBC1D10BQ4KMP7 808 aaPredicted RBP25.19■■□□□ 1.62
PABPC1-215ENST00000520804 TTLL11Q8NHH1 800 aa25.19■■□□□ 1.62
PABPC1-215ENST00000520804 CDC5LQ99459 802 aaKnown RBP25.19■■□□□ 1.62
PABPC1-215ENST00000520804 FANCIQ9NVI1 1328 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
PABPC1-215ENST00000520804 G3V3G9 751 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 EGFRP00533 1210 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 LBX1P52954 281 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 GRM1Q13255 1194 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 DCAF8Q5TAQ9 597 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 ZNF408Q9H9D4 720 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 MYH3P11055 1940 aa25.18■■□□□ 1.62
PABPC1-215ENST00000520804 USP48Q86UV5 1035 aa25.17■■□□□ 1.62
PABPC1-215ENST00000520804 HHIPL1Q96JK4 782 aa25.17■■□□□ 1.62
PABPC1-215ENST00000520804 GREM2Q9H772 168 aa25.17■■□□□ 1.62
PABPC1-215ENST00000520804 H7C1W4 665 aa25.16■■□□□ 1.62
PABPC1-215ENST00000520804 HSPA8P11142 646 aaKnown RBP25.16■■□□□ 1.62
PABPC1-215ENST00000520804 ATP2B4P23634 1241 aa25.16■■□□□ 1.62
PABPC1-215ENST00000520804 FLIIQ13045 1269 aa25.16■■□□□ 1.62
PABPC1-215ENST00000520804 WDR63Q8IWG1 891 aa25.16■■□□□ 1.62
PABPC1-215ENST00000520804 RBM26Q5T8P6 1007 aaKnown RBP25.15■■□□□ 1.62
PABPC1-215ENST00000520804 UBE3BQ7Z3V4 1068 aa25.15■■□□□ 1.62
PABPC1-215ENST00000520804 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
PABPC1-215ENST00000520804 ZNF609O15014 1411 aa25.14■■□□□ 1.62
PABPC1-215ENST00000520804 MAP2K2P36507 400 aa25.14■■□□□ 1.62
PABPC1-215ENST00000520804 BSDC1Q9NW68 430 aaPredicted RBP25.14■■□□□ 1.62
PABPC1-215ENST00000520804 VAMP4O75379 141 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 FKBP5Q13451 457 aaPredicted RBP25.13■■□□□ 1.61
PABPC1-215ENST00000520804 GCKRQ14397 625 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 KIF4BQ2VIQ3 1234 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 KRT26Q7Z3Y9 468 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 MINPP1Q9UNW1 487 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 PSME4Q14997 1843 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 CACNA1FO60840 1977 aa25.13■■□□□ 1.61
PABPC1-215ENST00000520804 SPEF2Q9C093 1822 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 AOC2O75106 756 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 RSBN1LQ6PCB5 846 aaPredicted RBP25.12■■□□□ 1.61
PABPC1-215ENST00000520804 DLK2Q6UY11 383 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 AGBL3Q8NEM8 1001 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 DNAAF4Q8WXU2 420 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 DCPSQ96C86 337 aaKnown RBP25.12■■□□□ 1.61
PABPC1-215ENST00000520804 BEGAINQ9BUH8 593 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 PLA2G12BQ9BX93 195 aa25.12■■□□□ 1.61
PABPC1-215ENST00000520804 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
PABPC1-215ENST00000520804 PODNQ7Z5L7 613 aa25.11■■□□□ 1.61
PABPC1-215ENST00000520804 POLR2AP24928 1970 aaKnown RBP25.11■■□□□ 1.61
PABPC1-215ENST00000520804 MED23Q9ULK4 1368 aa25.1■■□□□ 1.61
PABPC1-215ENST00000520804 CASP7P55210 303 aa25.1■■□□□ 1.61
PABPC1-215ENST00000520804 ZNF280AP59817 542 aaPredicted RBP25.1■■□□□ 1.61
PABPC1-215ENST00000520804 EXOSC9Q06265 439 aaKnown RBP25.1■■□□□ 1.61
PABPC1-215ENST00000520804 LINS1Q8NG48 757 aa25.1■■□□□ 1.61
PABPC1-215ENST00000520804 MYH16Q9H6N6 1097 aa25.1■■□□□ 1.61
PABPC1-215ENST00000520804 ADM5C9JUS6 153 aa25.09■■□□□ 1.61
PABPC1-215ENST00000520804 USP17L3A6NCW0 530 aa25.08■■□□□ 1.61
PABPC1-215ENST00000520804 USP17L4A6NCW7 530 aa25.08■■□□□ 1.61
PABPC1-215ENST00000520804 IGHMBP2P38935 993 aaKnown RBP25.08■■□□□ 1.61
PABPC1-215ENST00000520804 CCT4P50991 539 aaKnown RBP25.08■■□□□ 1.61
PABPC1-215ENST00000520804 USP17L1Q7RTZ2 530 aa25.08■■□□□ 1.61
PABPC1-215ENST00000520804 GMLQ99445 158 aa25.08■■□□□ 1.61
PABPC1-215ENST00000520804 GGA3Q9NZ52 723 aa25.08■■□□□ 1.61
PABPC1-215ENST00000520804 CSF1RP07333 972 aa25.07■■□□□ 1.6
PABPC1-215ENST00000520804 ITGA6P23229 1130 aa25.07■■□□□ 1.6
PABPC1-215ENST00000520804 HUNKP57058 714 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms