RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 KRT32Q14532 448 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 TSGA10IPQ3SY00 556 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 DNAJC10Q8IXB1 793 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 SH2B1Q9NRF2 756 aaPredicted RBP11.95□□□□□ -0.5
SPARC-202ENST00000520687 LIMCH1Q9UPQ0 1083 aa11.95□□□□□ -0.5
SPARC-202ENST00000520687 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.95□□□□□ -0.5
SPARC-202ENST00000520687 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
SPARC-202ENST00000520687 CSF1RP07333 972 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 CYP19A1P11511 503 aaPredicted RBP11.94□□□□□ -0.5
SPARC-202ENST00000520687 IL6STP40189 918 aaPredicted RBP11.94□□□□□ -0.5
SPARC-202ENST00000520687 HTRA3P83110 453 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 FSTL1Q12841 308 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 ANKRD1Q15327 319 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 TTC14Q96N46 770 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 BOLA2Q9H3K6 86 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 DBNLQ9UJU6 430 aaKnown RBP11.94□□□□□ -0.5
SPARC-202ENST00000520687 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
SPARC-202ENST00000520687 SSFA2P28290 1259 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
SPARC-202ENST00000520687 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 ATG9AQ7Z3C6 839 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 CEP126Q9P2H0 1117 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 BRPF3Q9ULD4 1205 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 MED23Q9ULK4 1368 aa11.93□□□□□ -0.5
SPARC-202ENST00000520687 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 KCNJ4P48050 445 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 IL25Q9H293 177 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 WDR33Q9C0J8 1336 aaKnown RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 GOLGA6L3A6NEY3 463 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 RGL2O15211 777 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 BRD1O95696 1058 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 ADRA2BP18089 450 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 USPL1Q5W0Q7 1092 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 KBTBD3Q8NAB2 608 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
SPARC-202ENST00000520687 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
SPARC-202ENST00000520687 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 FSD2A1L4K1 749 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 PTH1RQ03431 593 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
SPARC-202ENST00000520687 MCMDC2Q4G0Z9 681 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 CREB3L3Q68CJ9 461 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 CHMP4CQ96CF2 233 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
SPARC-202ENST00000520687 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 CD2APQ9Y5K6 639 aa11.91□□□□□ -0.5
SPARC-202ENST00000520687 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 ZFYP08048 801 aaPredicted RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 CCDC158Q5M9N0 1113 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 ZGPATQ8N5A5 531 aaKnown RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 JARID2Q92833 1246 aaPredicted RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 JAKMIP1Q96N16 626 aaKnown RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
SPARC-202ENST00000520687 NHSQ6T4R5 1651 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.5
SPARC-202ENST00000520687 ZNF831Q5JPB2 1677 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 SLC27A2O14975 620 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 TAF5LO75529 589 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 HMGB1P09429 215 aaKnown RBP11.89□□□□□ -0.51
SPARC-202ENST00000520687 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
SPARC-202ENST00000520687 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
SPARC-202ENST00000520687 MRE11P49959 708 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
SPARC-202ENST00000520687 TJP1Q07157 1748 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 ZNF609O15014 1411 aa11.89□□□□□ -0.51
SPARC-202ENST00000520687 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 PDE8AO60658 829 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 MBD3O95983 291 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 AK2P54819 239 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 PARP10Q53GL7 1025 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 ZNF512BQ96KM6 892 aaPredicted RBP11.88□□□□□ -0.51
SPARC-202ENST00000520687 PAG1Q9NWQ8 432 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 SPEF2Q9C093 1822 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
SPARC-202ENST00000520687 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
SPARC-202ENST00000520687 MLLT1Q03111 559 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms