RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
SKP1-207ENST00000520417 SPACA7Q96KW9 195 aa8.63□□□□□ -1.03
SKP1-207ENST00000520417 C9orf172C9J069 976 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 ABL1P00519 1130 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 PCSK2P16519 638 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 MPSTP25325 297 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 GRIK5Q16478 980 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
SKP1-207ENST00000520417 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
SKP1-207ENST00000520417 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
SKP1-207ENST00000520417 SELPP16109 830 aa8.61□□□□□ -1.03
SKP1-207ENST00000520417 SOX18P35713 384 aa8.61□□□□□ -1.03
SKP1-207ENST00000520417 HYAL2Q12891 473 aa8.61□□□□□ -1.03
SKP1-207ENST00000520417 IL22RA1Q8N6P7 574 aa8.61□□□□□ -1.03
SKP1-207ENST00000520417 ANO2Q9NQ90 1003 aa8.61□□□□□ -1.03
SKP1-207ENST00000520417 ABI2Q9NYB9 513 aaPredicted RBP8.61□□□□□ -1.03
SKP1-207ENST00000520417 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
SKP1-207ENST00000520417 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 OR13H1Q8NG92 308 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 TTC9Q92623 222 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 SEMA6BQ9H3T3 888 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
SKP1-207ENST00000520417 A6NHS1 94 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 CYP2E1P05181 493 aaPredicted RBP8.59□□□□□ -1.03
SKP1-207ENST00000520417 EIF1AXP47813 144 aaKnown RBP8.59□□□□□ -1.03
SKP1-207ENST00000520417 CEP135Q66GS9 1140 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
SKP1-207ENST00000520417 CDC25BP30305 580 aa8.58□□□□□ -1.04
SKP1-207ENST00000520417 ATP11AP98196 1134 aa8.58□□□□□ -1.04
SKP1-207ENST00000520417 NRG1Q02297 640 aaPredicted RBP8.58□□□□□ -1.04
SKP1-207ENST00000520417 LENG1Q96BZ8 264 aaPredicted RBP8.58□□□□□ -1.04
SKP1-207ENST00000520417 TPSG1Q9NRR2 321 aa8.58□□□□□ -1.04
SKP1-207ENST00000520417 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
SKP1-207ENST00000520417 ZNF211Q13398 564 aaPredicted RBP8.57□□□□□ -1.04
SKP1-207ENST00000520417 MBTPS1Q14703 1052 aa8.57□□□□□ -1.04
SKP1-207ENST00000520417 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
SKP1-207ENST00000520417 FBXO11Q86XK2 927 aa8.57□□□□□ -1.04
SKP1-207ENST00000520417 DTWD1Q8N5C7 304 aa8.57□□□□□ -1.04
SKP1-207ENST00000520417 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
SKP1-207ENST00000520417 PDGFAP04085 211 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 ADGRE1Q14246 886 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
SKP1-207ENST00000520417 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 HOXD8P13378 290 aaPredicted RBP8.55□□□□□ -1.04
SKP1-207ENST00000520417 CES1P23141 567 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 MZF1P28698 734 aaPredicted RBP8.55□□□□□ -1.04
SKP1-207ENST00000520417 PHLDB3Q6NSJ2 640 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 TXNDC11Q6PKC3 985 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 CNTN3Q9P232 1028 aa8.55□□□□□ -1.04
SKP1-207ENST00000520417 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
SKP1-207ENST00000520417 DEAF1O75398 565 aaPredicted RBP8.54□□□□□ -1.04
SKP1-207ENST00000520417 FAM13AO94988 1023 aa8.54□□□□□ -1.04
SKP1-207ENST00000520417 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
SKP1-207ENST00000520417 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
SKP1-207ENST00000520417 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
SKP1-207ENST00000520417 B4GALNT3Q6L9W6 998 aa8.53□□□□□ -1.04
SKP1-207ENST00000520417 IGF2-ASQ6U949 168 aa8.53□□□□□ -1.04
SKP1-207ENST00000520417 TP53INP1Q96A56 240 aa8.53□□□□□ -1.04
SKP1-207ENST00000520417 USTQ9Y2C2 406 aa8.53□□□□□ -1.04
SKP1-207ENST00000520417 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
SKP1-207ENST00000520417 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
SKP1-207ENST00000520417 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
SKP1-207ENST00000520417 ILDR2Q71H61 639 aa8.52□□□□□ -1.05
SKP1-207ENST00000520417 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
SKP1-207ENST00000520417 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
SKP1-207ENST00000520417 CDC27P30260 824 aa8.51□□□□□ -1.05
SKP1-207ENST00000520417 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
SKP1-207ENST00000520417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
SKP1-207ENST00000520417 ALX3O95076 343 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 KIF4AO95239 1232 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 ACPPP15309 386 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 SETDB1Q15047 1291 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 CACTIN-AS1Q8N1I8 211 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 CEP120Q8N960 986 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
SKP1-207ENST00000520417 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
SKP1-207ENST00000520417 H3BRB1 525 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 DLL1O00548 723 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 PHACTR2O75167 634 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 TRPA1O75762 1119 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 PTPRAP18433 802 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 NOS3P29474 1203 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 SERPINB4P48594 390 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 NKAPLQ5M9Q1 402 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 FAM117BQ6P1L5 589 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 XKR5Q6UX68 686 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
SKP1-207ENST00000520417 TUT1Q9H6E5 874 aaKnown RBP8.49□□□□□ -1.05
SKP1-207ENST00000520417 DYRK3O43781 588 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms