RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 TBC1D16Q8TBP0 767 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 ZNF408Q9H9D4 720 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 NEURL1BA8MQ27 555 aa20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 TRAF5O00463 557 aa20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 PSMD14O00487 310 aa20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 MICALL2Q8IY33 904 aa20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 CNOT7Q9UIV1 285 aaKnown RBP20.61■□□□□ 0.89
IGHV3-42-201ENST00000520410 AIDAQ96BJ3 306 aa20.6■□□□□ 0.89
IGHV3-42-201ENST00000520410 VEGFBP49765 207 aa20.59■□□□□ 0.89
IGHV3-42-201ENST00000520410 DEFB115Q30KQ5 88 aa20.59■□□□□ 0.89
IGHV3-42-201ENST00000520410 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
IGHV3-42-201ENST00000520410 RBM26Q5T8P6 1007 aaKnown RBP20.59■□□□□ 0.89
IGHV3-42-201ENST00000520410 DNAAF4Q8WXU2 420 aa20.59■□□□□ 0.89
IGHV3-42-201ENST00000520410 SHTN1A0MZ66 631 aa20.58■□□□□ 0.89
IGHV3-42-201ENST00000520410 COL13A1Q5TAT6 717 aaPredicted RBP20.58■□□□□ 0.89
IGHV3-42-201ENST00000520410 TRPM4Q8TD43 1214 aa20.58■□□□□ 0.89
IGHV3-42-201ENST00000520410 FBXW7Q969H0 707 aa20.58■□□□□ 0.89
IGHV3-42-201ENST00000520410 GREM2Q9H772 168 aa20.58■□□□□ 0.89
IGHV3-42-201ENST00000520410 XDHP47989 1333 aa20.57■□□□□ 0.88
IGHV3-42-201ENST00000520410 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
IGHV3-42-201ENST00000520410 TBC1D10BQ4KMP7 808 aaPredicted RBP20.57■□□□□ 0.88
IGHV3-42-201ENST00000520410 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
IGHV3-42-201ENST00000520410 CHMP3Q9Y3E7 222 aa20.57■□□□□ 0.88
IGHV3-42-201ENST00000520410 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
IGHV3-42-201ENST00000520410 VAMP4O75379 141 aa20.56■□□□□ 0.88
IGHV3-42-201ENST00000520410 TTLL11Q8NHH1 800 aa20.56■□□□□ 0.88
IGHV3-42-201ENST00000520410 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
IGHV3-42-201ENST00000520410 PODXL2Q9NZ53 605 aa20.56■□□□□ 0.88
IGHV3-42-201ENST00000520410 CELF2O95319 508 aaKnown RBP20.55■□□□□ 0.88
IGHV3-42-201ENST00000520410 ATP2B4P23634 1241 aa20.55■□□□□ 0.88
IGHV3-42-201ENST00000520410 GCKRQ14397 625 aa20.55■□□□□ 0.88
IGHV3-42-201ENST00000520410 SAMD7Q7Z3H4 446 aa20.55■□□□□ 0.88
IGHV3-42-201ENST00000520410 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
IGHV3-42-201ENST00000520410 F6X3S4 739 aa20.54■□□□□ 0.88
IGHV3-42-201ENST00000520410 CAPN15O75808 1086 aa20.54■□□□□ 0.88
IGHV3-42-201ENST00000520410 LINS1Q8NG48 757 aa20.54■□□□□ 0.88
IGHV3-42-201ENST00000520410 MPHOSPH8Q99549 860 aa20.54■□□□□ 0.88
IGHV3-42-201ENST00000520410 SPINK5Q9NQ38 1064 aaPredicted RBP20.54■□□□□ 0.88
IGHV3-42-201ENST00000520410 RASSF10A6NK89 507 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 H7C1W4 665 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 RPS12P25398 132 aaKnown RBP20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 KCNJ4P48050 445 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 RTL9Q8NET4 1388 aa20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 WDR33Q9C0J8 1336 aaKnown RBP20.53■□□□□ 0.88
IGHV3-42-201ENST00000520410 ITGA6P23229 1130 aa20.52■□□□□ 0.88
IGHV3-42-201ENST00000520410 HIRAP54198 1017 aaPredicted RBP20.52■□□□□ 0.88
IGHV3-42-201ENST00000520410 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
IGHV3-42-201ENST00000520410 DPF2Q92785 391 aa20.52■□□□□ 0.88
IGHV3-42-201ENST00000520410 MYH3P11055 1940 aa20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 ECE1P42892 770 aa20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 BSDC1Q9NW68 430 aaPredicted RBP20.51■□□□□ 0.87
IGHV3-42-201ENST00000520410 FOXN1O15353 648 aa20.5■□□□□ 0.87
IGHV3-42-201ENST00000520410 CAPNS2Q96L46 248 aa20.5■□□□□ 0.87
IGHV3-42-201ENST00000520410 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
IGHV3-42-201ENST00000520410 ANKRD18BA2A2Z9 1011 aa20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 CCT4P50991 539 aaKnown RBP20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 CST9Q5W186 159 aa20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 BEGAINQ9BUH8 593 aa20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
IGHV3-42-201ENST00000520410 EGFRP00533 1210 aa20.48■□□□□ 0.87
IGHV3-42-201ENST00000520410 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
IGHV3-42-201ENST00000520410 KRT26Q7Z3Y9 468 aa20.48■□□□□ 0.87
IGHV3-42-201ENST00000520410 C9orf78Q9NZ63 289 aaPredicted RBP20.48■□□□□ 0.87
IGHV3-42-201ENST00000520410 TRPM7Q96QT4 1865 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 ADM5C9JUS6 153 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 VIL1P09327 827 aaKnown RBP20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 USP17L1Q7RTZ2 530 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 ANKRD2Q9GZV1 360 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
IGHV3-42-201ENST00000520410 WTIPA6NIX2 430 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 CTCFP49711 727 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 MAP2K1Q02750 393 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 DLK2Q6UY11 383 aa20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 PODNQ7Z5L7 613 aa20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 PLA2G12BQ9BX93 195 aa20.46■□□□□ 0.87
IGHV3-42-201ENST00000520410 BEND3Q5T5X7 828 aa20.45■□□□□ 0.86
IGHV3-42-201ENST00000520410 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
IGHV3-42-201ENST00000520410 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
IGHV3-42-201ENST00000520410 ZNF804BA4D1E1 1349 aa20.45■□□□□ 0.86
IGHV3-42-201ENST00000520410 AOC2O75106 756 aa20.44■□□□□ 0.86
IGHV3-42-201ENST00000520410 USP17L8P0C7I0 530 aa20.44■□□□□ 0.86
IGHV3-42-201ENST00000520410 CASP7P55210 303 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms