RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 ZSCAN1Q8NBB4 408 aa9.27□□□□□ -0.93
NPM1-206ENST00000519955 MDFIQ99750 246 aa9.27□□□□□ -0.93
NPM1-206ENST00000519955 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
NPM1-206ENST00000519955 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
NPM1-206ENST00000519955 ELOA3DA6NLF2 546 aaPredicted RBP9.26□□□□□ -0.93
NPM1-206ENST00000519955 KIF4AO95239 1232 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 LDHBP07195 334 aaKnown RBP9.26□□□□□ -0.93
NPM1-206ENST00000519955 EDN3P14138 238 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 ALAS2P22557 587 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 ADH7P40394 386 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 ELOA3BQ3SY89 546 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 ELOA3Q8NG57 546 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 FBF1Q8TES7 1133 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 KANSL3Q9P2N6 904 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 SALL4Q9UJQ4 1053 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
NPM1-206ENST00000519955 ZBTB42B2RXF5 422 aa9.25□□□□□ -0.93
NPM1-206ENST00000519955 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
NPM1-206ENST00000519955 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
NPM1-206ENST00000519955 GALNT12Q8IXK2 581 aa9.25□□□□□ -0.93
NPM1-206ENST00000519955 SPACA7Q96KW9 195 aa9.25□□□□□ -0.93
NPM1-206ENST00000519955 NSUN5Q96P11 429 aaKnown RBP9.25□□□□□ -0.93
NPM1-206ENST00000519955 LOC102724428A0A0B4J2F2 783 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 PRPF40AO75400 957 aaKnown RBP9.24□□□□□ -0.93
NPM1-206ENST00000519955 BCRP11274 1271 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 EPXP11678 715 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 SIK1P57059 783 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
NPM1-206ENST00000519955 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
NPM1-206ENST00000519955 FOXD4L4Q8WXT5 416 aaPredicted RBP9.24□□□□□ -0.93
NPM1-206ENST00000519955 CCDC74AQ96AQ1 378 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
NPM1-206ENST00000519955 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
NPM1-206ENST00000519955 OIP5O43482 229 aa9.23□□□□□ -0.93
NPM1-206ENST00000519955 GHRHP01286 108 aa9.23□□□□□ -0.93
NPM1-206ENST00000519955 POLR3DP05423 398 aaPredicted RBP9.23□□□□□ -0.93
NPM1-206ENST00000519955 COL13A1Q5TAT6 717 aaPredicted RBP9.23□□□□□ -0.93
NPM1-206ENST00000519955 FAM35AQ86V20 835 aa9.23□□□□□ -0.93
NPM1-206ENST00000519955 GIPC2Q8TF65 315 aa9.23□□□□□ -0.93
NPM1-206ENST00000519955 EDARADDQ8WWZ3 215 aa9.23□□□□□ -0.93
NPM1-206ENST00000519955 CEP120Q8N960 986 aa9.22□□□□□ -0.93
NPM1-206ENST00000519955 GALNT6Q8NCL4 622 aa9.22□□□□□ -0.93
NPM1-206ENST00000519955 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
NPM1-206ENST00000519955 J3QW42 95 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
NPM1-206ENST00000519955 CPB1P15086 417 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 EIF2AK2P19525 551 aaKnown RBP9.21□□□□□ -0.94
NPM1-206ENST00000519955 SUZ12Q15022 739 aaKnown RBP9.21□□□□□ -0.94
NPM1-206ENST00000519955 KANK3Q6NY19 840 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 LYPD4Q6UWN0 246 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 C1orf229Q6ZS94 237 aaPredicted RBP9.21□□□□□ -0.94
NPM1-206ENST00000519955 HFE2Q6ZVN8 426 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 BCL11AQ9H165 835 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 NLRP2Q9NX02 1062 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 FRRS1LQ9P0K9 344 aa9.21□□□□□ -0.94
NPM1-206ENST00000519955 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
NPM1-206ENST00000519955 FRMD6Q96NE9 622 aa9.2□□□□□ -0.94
NPM1-206ENST00000519955 SETDB2Q96T68 719 aa9.2□□□□□ -0.94
NPM1-206ENST00000519955 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
NPM1-206ENST00000519955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
NPM1-206ENST00000519955 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
NPM1-206ENST00000519955 KIAA0319Q5VV43 1072 aa9.19□□□□□ -0.94
NPM1-206ENST00000519955 PEAR1Q5VY43 1037 aaPredicted RBP9.19□□□□□ -0.94
NPM1-206ENST00000519955 ELMSAN1Q6PJG2 1045 aa9.19□□□□□ -0.94
NPM1-206ENST00000519955 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
NPM1-206ENST00000519955 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
NPM1-206ENST00000519955 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
NPM1-206ENST00000519955 IRS1P35568 1242 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 ITGAEP38570 1179 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPM1-206ENST00000519955 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 MICALL1Q8N3F8 863 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 BTBD6Q96KE9 485 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 OSMRQ99650 979 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
NPM1-206ENST00000519955 PBX4Q9BYU1 374 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 ENAMQ9NRM1 1142 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 DZANK1Q9NVP4 752 aa9.18□□□□□ -0.94
NPM1-206ENST00000519955 A0A1W2PP55 124 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 SHISA8B8ZZ34 492 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 GIPC1O14908 333 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPM1-206ENST00000519955 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
NPM1-206ENST00000519955 TAGLNQ01995 201 aaKnown RBP9.17□□□□□ -0.94
NPM1-206ENST00000519955 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
NPM1-206ENST00000519955 PSAPL1Q6NUJ1 521 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 TTC9Q92623 222 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 PLD4Q96BZ4 506 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 LPIN3Q9BQK8 851 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 ZKSCAN3Q9BRR0 538 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 LATS2Q9NRM7 1088 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 STARD13Q9Y3M8 1113 aa9.17□□□□□ -0.94
NPM1-206ENST00000519955 RGS9O75916 674 aaPredicted RBP9.16□□□□□ -0.94
NPM1-206ENST00000519955 AMPD1P23109 780 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms