RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 PRKRIP1Q9H875 184 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC2-208ENST00000519885 FMN2Q9NZ56 1722 aa6.53□□□□□ -1.36
TRAPPC2-208ENST00000519885 PTPRUQ92729 1446 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 NSD3Q9BZ95 1437 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 BACH1O14867 736 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 AVPP01185 164 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 CENPBP07199 599 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 HMGB1P09429 215 aaKnown RBP6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 NPR3P17342 541 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 ECM1Q16610 540 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 GAS2L2Q8NHY3 880 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 PKD2L1Q9P0L9 805 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 IQSEC2Q5JU85 1478 aa6.52□□□□□ -1.37
TRAPPC2-208ENST00000519885 CPSF1Q10570 1443 aaKnown RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 MON2Q7Z3U7 1717 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 NALCNQ8IZF0 1738 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 ANKRD26Q9UPS8 1709 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 C11orf95C9JLR9 678 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 WFS1O76024 890 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 ZC3H6P61129 1189 aaKnown RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 CFAP53Q96M91 514 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 KCTD15Q96SI1 283 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 HIRIP3Q9BW71 556 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 CDK19Q9BWU1 502 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 ZNF358Q9NW07 568 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 A0A1W2PP64 1363 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 POLR3AO14802 1390 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
TRAPPC2-208ENST00000519885 TTC24A2A3L6 582 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 NDUFB5O43674 189 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 RECKO95980 971 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 ATF3P18847 181 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 INSM1Q01101 510 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 TRIM32Q13049 653 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 SREK1Q8WXA9 508 aaKnown RBP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 CITED4Q96RK1 184 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 PNNQ9H307 717 aaKnown RBP6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 PANK3Q9H999 370 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 TOR4AQ9NXH8 423 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 KIF20BQ96Q89 1820 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 USP6P35125 1406 aa6.5□□□□□ -1.37
TRAPPC2-208ENST00000519885 AKAP12Q02952 1782 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 STRCQ7RTU9 1775 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 NRKQ7Z2Y5 1582 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 SKOR1P84550 965 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 MTMR3Q13615 1198 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 SAFB2Q14151 953 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 NUDT16Q96DE0 195 aaKnown RBP6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 ABCC6O95255 1503 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 USP54Q70EL1 1684 aa6.49□□□□□ -1.37
TRAPPC2-208ENST00000519885 AATKQ6ZMQ8 1374 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 PLEKHH1Q9ULM0 1364 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 SCTRP47872 440 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 ERVK-9P63128 1117 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 ALKBH2Q6NS38 261 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 PURBQ96QR8 312 aaKnown RBP6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 STK17AQ9UEE5 414 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 MST1RQ04912 1400 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
TRAPPC2-208ENST00000519885 RTL1A6NKG5 1358 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 ARHGEF10O15013 1369 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 TMEM94Q12767 1356 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 PLEKHG2Q9H7P9 1386 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 TMEM229AB2RXF0 380 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 ERVH48-1M5A8F1 160 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 NEFMP07197 916 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 VARSP26640 1264 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 NAA30Q147X3 362 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 SF3A1Q15459 793 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 TSNAXIP1Q2TAA8 658 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 CAPN12Q6ZSI9 719 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 NGDNQ8NEJ9 315 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 SCG3Q8WXD2 468 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 COG3Q96JB2 828 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 MRS2Q9HD23 443 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 GMPR2Q9P2T1 348 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 SMG6Q86US8 1419 aaKnown RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 CDK12Q9NYV4 1490 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC2-208ENST00000519885 SCAMP3O14828 347 aaKnown RBP6.46□□□□□ -1.38
TRAPPC2-208ENST00000519885 TREHO43280 583 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms