RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 KLHL40Q2TBA0 621 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 FOXD4L4Q8WXT5 416 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 ISY1Q9ULR0 285 aaKnown RBP10.08□□□□□ -0.8
HMGB4-203ENST00000519684 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
HMGB4-203ENST00000519684 PDE8AO60658 829 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 ITGA6P23229 1130 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 CNNM1Q9NRU3 951 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 CRKLP46109 303 aaKnown RBP10.07□□□□□ -0.8
HMGB4-203ENST00000519684 SIK1P57059 783 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 USPL1Q5W0Q7 1092 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 LDHAL6AQ6ZMR3 332 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 AK7Q96M32 723 aa10.07□□□□□ -0.8
HMGB4-203ENST00000519684 RIC1Q4ADV7 1423 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 ATP2B3Q16720 1220 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 CCDC129Q6ZRS4 1044 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 ZNF34Q8IZ26 560 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 GREM2Q9H772 168 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 ABCC12Q96J65 1359 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 FSD2A1L4K1 749 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 RNF113AO15541 343 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
HMGB4-203ENST00000519684 CCDC83Q8IWF9 413 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 LMBRD1Q9NUN5 540 aa10.06□□□□□ -0.8
HMGB4-203ENST00000519684 UBN2Q6ZU65 1347 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 HSP90B1P14625 803 aaKnown RBP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 ADORA1P30542 326 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 FKBP4Q02790 459 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 PARP10Q53GL7 1025 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 SEC62Q99442 399 aaKnown RBP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 ALDH8A1Q9H2A2 487 aaPredicted RBP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 ZFYP08048 801 aaPredicted RBP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 MRE11P49959 708 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 C8orf37Q96NL8 207 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 DSCC1Q9BVC3 393 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
HMGB4-203ENST00000519684 RIPOR2Q9Y4F9 1068 aa10.05□□□□□ -0.8
HMGB4-203ENST00000519684 LARGE1O95461 756 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
HMGB4-203ENST00000519684 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
HMGB4-203ENST00000519684 ZNF831Q5JPB2 1677 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 LRP5O75197 1615 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 LAMB2P55268 1798 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 STX6O43752 255 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 MBD3O95983 291 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
HMGB4-203ENST00000519684 GJB2P29033 226 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 ITPK1Q13572 414 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 VPS72Q15906 364 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
HMGB4-203ENST00000519684 MYH7P12883 1935 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 MAST3O60307 1309 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 MROH5Q6ZUA9 1318 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 CHGBP05060 677 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
HMGB4-203ENST00000519684 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
HMGB4-203ENST00000519684 ME3Q16798 604 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 SUSD4Q5VX71 490 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
HMGB4-203ENST00000519684 TPCN1Q9ULQ1 816 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 ARAP2Q8WZ64 1704 aa10.03□□□□□ -0.8
HMGB4-203ENST00000519684 FAM177BA6PVY3 158 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 SYT1P21579 422 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 KCNA4P22459 653 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 FGD1P98174 961 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 WASHC4Q2M389 1173 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 ZSCAN25Q6NSZ9 544 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.8
HMGB4-203ENST00000519684 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.8
HMGB4-203ENST00000519684 DDX60Q8IY21 1712 aaKnown RBP10.02□□□□□ -0.81
HMGB4-203ENST00000519684 PDE8BO95263 885 aa10.02□□□□□ -0.81
HMGB4-203ENST00000519684 CYP21A2P08686 494 aa10.02□□□□□ -0.81
HMGB4-203ENST00000519684 ZAP70P43403 619 aa10.02□□□□□ -0.81
HMGB4-203ENST00000519684 TTF1Q15361 905 aaPredicted RBP10.02□□□□□ -0.81
HMGB4-203ENST00000519684 NECAB1Q8N987 351 aa10.02□□□□□ -0.81
HMGB4-203ENST00000519684 NIP7Q9Y221 180 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMGB4-203ENST00000519684 TAF6LQ9Y6J9 622 aa10.02□□□□□ -0.81
HMGB4-203ENST00000519684 M0R2C6 588 aa10.01□□□□□ -0.81
HMGB4-203ENST00000519684 KCNQ2O43526 872 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms