RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TRPM4Q8TD43 1214 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
CSMD1-205ENST00000519623 EYA3Q99504 573 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 WBP1LQ9NX94 342 aa15.99■□□□□ 0.15
CSMD1-205ENST00000519623 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
CSMD1-205ENST00000519623 H7C1D1 291 aa15.98■□□□□ 0.15
CSMD1-205ENST00000519623 ECE2O60344 883 aa15.98■□□□□ 0.15
CSMD1-205ENST00000519623 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
CSMD1-205ENST00000519623 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
CSMD1-205ENST00000519623 GLIS2Q9BZE0 524 aaPredicted RBP15.98■□□□□ 0.15
CSMD1-205ENST00000519623 ZC3H12CQ9C0D7 883 aaKnown RBP15.98■□□□□ 0.15
CSMD1-205ENST00000519623 RTL9Q8NET4 1388 aa15.98■□□□□ 0.15
CSMD1-205ENST00000519623 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 H7C1W4 665 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 VAMP4O75379 141 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 WDR63Q8IWG1 891 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 TTLL11Q8NHH1 800 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
CSMD1-205ENST00000519623 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 UFL1O94874 794 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
CSMD1-205ENST00000519623 CTSWP56202 376 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 SAMD7Q7Z3H4 446 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 GGA1Q9UJY5 639 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
CSMD1-205ENST00000519623 SCN9AQ15858 1988 aa15.96■□□□□ 0.15
CSMD1-205ENST00000519623 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
CSMD1-205ENST00000519623 EGFRP00533 1210 aa15.95■□□□□ 0.14
CSMD1-205ENST00000519623 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
CSMD1-205ENST00000519623 FLIIQ13045 1269 aa15.95■□□□□ 0.14
CSMD1-205ENST00000519623 CDC37L1Q7L3B6 337 aa15.95■□□□□ 0.14
CSMD1-205ENST00000519623 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
CSMD1-205ENST00000519623 WTIPA6NIX2 430 aaPredicted RBP15.94■□□□□ 0.14
CSMD1-205ENST00000519623 CELF2O95319 508 aaKnown RBP15.94■□□□□ 0.14
CSMD1-205ENST00000519623 CTCFP49711 727 aaPredicted RBP15.94■□□□□ 0.14
CSMD1-205ENST00000519623 CYP4F22Q6NT55 531 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 SAPCD2Q86UD0 394 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 AIDAQ96BJ3 306 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 CAPNS2Q96L46 248 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 GREM2Q9H772 168 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
CSMD1-205ENST00000519623 PRDM10Q9NQV6 1147 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 XDHP47989 1333 aa15.94■□□□□ 0.14
CSMD1-205ENST00000519623 CASP7P55210 303 aa15.93■□□□□ 0.14
CSMD1-205ENST00000519623 MAP2K1Q02750 393 aaPredicted RBP15.93■□□□□ 0.14
CSMD1-205ENST00000519623 EXOSC9Q06265 439 aaKnown RBP15.93■□□□□ 0.14
CSMD1-205ENST00000519623 GCKRQ14397 625 aa15.93■□□□□ 0.14
CSMD1-205ENST00000519623 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
CSMD1-205ENST00000519623 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
CSMD1-205ENST00000519623 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
CSMD1-205ENST00000519623 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
CSMD1-205ENST00000519623 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
CSMD1-205ENST00000519623 MYH3P11055 1940 aa15.93■□□□□ 0.14
CSMD1-205ENST00000519623 G3V3G9 751 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 ECE1P42892 770 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 RBM26Q5T8P6 1007 aaKnown RBP15.92■□□□□ 0.14
CSMD1-205ENST00000519623 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 PLA2G12BQ9BX93 195 aa15.92■□□□□ 0.14
CSMD1-205ENST00000519623 CSF1RP07333 972 aa15.91■□□□□ 0.14
CSMD1-205ENST00000519623 LBX1P52954 281 aa15.91■□□□□ 0.14
CSMD1-205ENST00000519623 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
CSMD1-205ENST00000519623 PAXIP1Q6ZW49 1069 aaPredicted RBP15.91■□□□□ 0.14
CSMD1-205ENST00000519623 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
CSMD1-205ENST00000519623 HHIPL1Q96JK4 782 aa15.91■□□□□ 0.14
CSMD1-205ENST00000519623 CAPN15O75808 1086 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 MAP2K2P36507 400 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 ZNF280AP59817 542 aaPredicted RBP15.9■□□□□ 0.14
CSMD1-205ENST00000519623 RSBN1LQ6PCB5 846 aaPredicted RBP15.9■□□□□ 0.14
CSMD1-205ENST00000519623 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 GMLQ99445 158 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 ZNF408Q9H9D4 720 aa15.9■□□□□ 0.14
CSMD1-205ENST00000519623 AOC2O75106 756 aa15.89■□□□□ 0.13
CSMD1-205ENST00000519623 HSPA8P11142 646 aaKnown RBP15.89■□□□□ 0.13
CSMD1-205ENST00000519623 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
CSMD1-205ENST00000519623 GRM1Q13255 1194 aa15.89■□□□□ 0.13
CSMD1-205ENST00000519623 KRT26Q7Z3Y9 468 aa15.89■□□□□ 0.13
CSMD1-205ENST00000519623 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
CSMD1-205ENST00000519623 PSME4Q14997 1843 aa15.89■□□□□ 0.13
CSMD1-205ENST00000519623 ZNF609O15014 1411 aa15.88■□□□□ 0.13
CSMD1-205ENST00000519623 THSD7BQ9C0I4 1608 aa15.88■□□□□ 0.13
CSMD1-205ENST00000519623 ITGA6P23229 1130 aa15.88■□□□□ 0.13
CSMD1-205ENST00000519623 KIF4BQ2VIQ3 1234 aa15.88■□□□□ 0.13
CSMD1-205ENST00000519623 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
CSMD1-205ENST00000519623 MYH16Q9H6N6 1097 aa15.88■□□□□ 0.13
CSMD1-205ENST00000519623 ASTN2O75129 1339 aaPredicted RBP15.88■□□□□ 0.13
CSMD1-205ENST00000519623 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
CSMD1-205ENST00000519623 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CSMD1-205ENST00000519623 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CSMD1-205ENST00000519623 F6X3S4 739 aa15.87■□□□□ 0.13
CSMD1-205ENST00000519623 IGHMBP2P38935 993 aaKnown RBP15.87■□□□□ 0.13
CSMD1-205ENST00000519623 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
CSMD1-205ENST00000519623 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms