RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 CCDC85AQ96PX6 553 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-202ENST00000519219 MCOLN1Q9GZU1 580 aa11.39□□□□□ -0.59
TRIM35-202ENST00000519219 DBF4Q9UBU7 674 aaPredicted RBP11.39□□□□□ -0.59
TRIM35-202ENST00000519219 MYH3P11055 1940 aa11.39□□□□□ -0.59
TRIM35-202ENST00000519219 WTIPA6NIX2 430 aaPredicted RBP11.38□□□□□ -0.59
TRIM35-202ENST00000519219 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
TRIM35-202ENST00000519219 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
TRIM35-202ENST00000519219 HUNKP57058 714 aa11.38□□□□□ -0.59
TRIM35-202ENST00000519219 KRT26Q7Z3Y9 468 aa11.38□□□□□ -0.59
TRIM35-202ENST00000519219 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
TRIM35-202ENST00000519219 DPF2Q92785 391 aa11.38□□□□□ -0.59
TRIM35-202ENST00000519219 HHIPL1Q96JK4 782 aa11.38□□□□□ -0.59
TRIM35-202ENST00000519219 HOXB7P09629 217 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
TRIM35-202ENST00000519219 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRIM35-202ENST00000519219 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 MYD88Q99836 296 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 GGA3Q9NZ52 723 aa11.37□□□□□ -0.59
TRIM35-202ENST00000519219 SCAF8Q9UPN6 1271 aaKnown RBP11.37□□□□□ -0.59
TRIM35-202ENST00000519219 UFL1O94874 794 aa11.36□□□□□ -0.59
TRIM35-202ENST00000519219 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
TRIM35-202ENST00000519219 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
TRIM35-202ENST00000519219 GBA2Q9HCG7 927 aaPredicted RBP11.36□□□□□ -0.59
TRIM35-202ENST00000519219 APAF1O14727 1248 aa11.35□□□□□ -0.59
TRIM35-202ENST00000519219 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
TRIM35-202ENST00000519219 NOGQ13253 232 aa11.35□□□□□ -0.59
TRIM35-202ENST00000519219 DGKZQ13574 1117 aa11.35□□□□□ -0.59
TRIM35-202ENST00000519219 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
TRIM35-202ENST00000519219 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
TRIM35-202ENST00000519219 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
TRIM35-202ENST00000519219 TNRC18O15417 2968 aaPredicted RBP11.35□□□□□ -0.59
TRIM35-202ENST00000519219 PDE4DIPQ5VU43 2346 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 CA12O43570 354 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 RPS12P25398 132 aaKnown RBP11.34□□□□□ -0.59
TRIM35-202ENST00000519219 RGS19P49795 217 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 KIF23Q02241 960 aaPredicted RBP11.34□□□□□ -0.59
TRIM35-202ENST00000519219 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 TSPYL6Q8N831 410 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
TRIM35-202ENST00000519219 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 EYA3Q99504 573 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
TRIM35-202ENST00000519219 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-202ENST00000519219 MLLT1Q03111 559 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-202ENST00000519219 ANGEL2Q5VTE6 544 aaKnown RBP11.33□□□□□ -0.6
TRIM35-202ENST00000519219 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 C2orf69Q8N8R5 385 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 GMLQ99445 158 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
TRIM35-202ENST00000519219 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.6
TRIM35-202ENST00000519219 PDE8AO60658 829 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 SLC10A3P09131 477 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-202ENST00000519219 ZNF280AP59817 542 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-202ENST00000519219 SCARF1Q14162 830 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 PRAMEF18Q5VWM3 479 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-202ENST00000519219 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-202ENST00000519219 IFT57Q9NWB7 429 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 RNF186Q9NXI6 227 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 ZNF609O15014 1411 aa11.32□□□□□ -0.6
TRIM35-202ENST00000519219 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 TRPA1O75762 1119 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 CCDC152Q4G0S7 254 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 RASAL3Q86YV0 1011 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 CSRNP1Q96S65 589 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
TRIM35-202ENST00000519219 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
TRIM35-202ENST00000519219 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
TRIM35-202ENST00000519219 G3V3G9 751 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 CTSWP56202 376 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 GNAI1P63096 354 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 TXNRD3Q86VQ6 643 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
TRIM35-202ENST00000519219 GREM2Q9H772 168 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 XDHP47989 1333 aa11.3□□□□□ -0.6
TRIM35-202ENST00000519219 KLRK1P26718 216 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 SOX10P56693 466 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
TRIM35-202ENST00000519219 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 G2E3Q7L622 706 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 AGBL3Q8NEM8 1001 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
TRIM35-202ENST00000519219 PI4KAP2A4QPH2 592 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms