RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 RIMBP2O15034 1052 aa20.18■□□□□ 0.82
MRPS28-204ENST00000519120 ECE2O60344 883 aa20.18■□□□□ 0.82
MRPS28-204ENST00000519120 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
MRPS28-204ENST00000519120 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
MRPS28-204ENST00000519120 XDHP47989 1333 aa20.18■□□□□ 0.82
MRPS28-204ENST00000519120 ZNF609O15014 1411 aa20.18■□□□□ 0.82
MRPS28-204ENST00000519120 PSMD14O00487 310 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 UFL1O94874 794 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 VEGFBP49765 207 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 EXOSC9Q06265 439 aaKnown RBP20.17■□□□□ 0.82
MRPS28-204ENST00000519120 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
MRPS28-204ENST00000519120 DEFB115Q30KQ5 88 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 LINS1Q8NG48 757 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
MRPS28-204ENST00000519120 GCKRQ14397 625 aa20.16■□□□□ 0.82
MRPS28-204ENST00000519120 COL13A1Q5TAT6 717 aaPredicted RBP20.16■□□□□ 0.82
MRPS28-204ENST00000519120 MICALL2Q8IY33 904 aa20.16■□□□□ 0.82
MRPS28-204ENST00000519120 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
MRPS28-204ENST00000519120 MYH3P11055 1940 aa20.15■□□□□ 0.82
MRPS28-204ENST00000519120 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
MRPS28-204ENST00000519120 HIRAP54198 1017 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-204ENST00000519120 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
MRPS28-204ENST00000519120 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
MRPS28-204ENST00000519120 CCDC85AQ96PX6 553 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-204ENST00000519120 GREM2Q9H772 168 aa20.15■□□□□ 0.82
MRPS28-204ENST00000519120 BSDC1Q9NW68 430 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-204ENST00000519120 ABT1Q9ULW3 272 aaKnown RBP20.15■□□□□ 0.82
MRPS28-204ENST00000519120 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
MRPS28-204ENST00000519120 TRPM7Q96QT4 1865 aa20.14■□□□□ 0.81
MRPS28-204ENST00000519120 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
MRPS28-204ENST00000519120 CASP7P55210 303 aa20.14■□□□□ 0.81
MRPS28-204ENST00000519120 CST9Q5W186 159 aa20.14■□□□□ 0.81
MRPS28-204ENST00000519120 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
MRPS28-204ENST00000519120 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
MRPS28-204ENST00000519120 TRAF5O00463 557 aa20.13■□□□□ 0.81
MRPS28-204ENST00000519120 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
MRPS28-204ENST00000519120 GPR101Q96P66 508 aaPredicted RBP20.13■□□□□ 0.81
MRPS28-204ENST00000519120 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
MRPS28-204ENST00000519120 TLL2Q9Y6L7 1015 aa20.13■□□□□ 0.81
MRPS28-204ENST00000519120 THSD7BQ9C0I4 1608 aa20.13■□□□□ 0.81
MRPS28-204ENST00000519120 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
MRPS28-204ENST00000519120 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
MRPS28-204ENST00000519120 G3V3G9 751 aa20.12■□□□□ 0.81
MRPS28-204ENST00000519120 CSF1RP07333 972 aa20.12■□□□□ 0.81
MRPS28-204ENST00000519120 FMR1Q06787 632 aaKnown RBP eCLIP20.12■□□□□ 0.81
MRPS28-204ENST00000519120 DCAF8Q5TAQ9 597 aa20.12■□□□□ 0.81
MRPS28-204ENST00000519120 MINPP1Q9UNW1 487 aa20.12■□□□□ 0.81
MRPS28-204ENST00000519120 ZNF521Q96K83 1311 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 ECE1P42892 770 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 PODNQ7Z5L7 613 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 HHIPL1Q96JK4 782 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 GLIS2Q9BZE0 524 aaPredicted RBP20.11■□□□□ 0.81
MRPS28-204ENST00000519120 KCNQ5Q9NR82 932 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 WBP1LQ9NX94 342 aa20.11■□□□□ 0.81
MRPS28-204ENST00000519120 SHTN1A0MZ66 631 aa20.1■□□□□ 0.81
MRPS28-204ENST00000519120 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
MRPS28-204ENST00000519120 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
MRPS28-204ENST00000519120 SCN9AQ15858 1988 aa20.1■□□□□ 0.81
MRPS28-204ENST00000519120 PSME4Q14997 1843 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 ITGA6P23229 1130 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
MRPS28-204ENST00000519120 BEND3Q5T5X7 828 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 SAMD7Q7Z3H4 446 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 LEMD3Q9Y2U8 911 aa20.09■□□□□ 0.81
MRPS28-204ENST00000519120 FOXN1O15353 648 aa20.08■□□□□ 0.81
MRPS28-204ENST00000519120 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
MRPS28-204ENST00000519120 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.81
MRPS28-204ENST00000519120 ZNF280AP59817 542 aaPredicted RBP20.08■□□□□ 0.81
MRPS28-204ENST00000519120 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.81
MRPS28-204ENST00000519120 RSBN1LQ6PCB5 846 aaPredicted RBP20.08■□□□□ 0.81
MRPS28-204ENST00000519120 SAPCD2Q86UD0 394 aa20.08■□□□□ 0.81
MRPS28-204ENST00000519120 CAPNS2Q96L46 248 aa20.08■□□□□ 0.81
MRPS28-204ENST00000519120 PRDM10Q9NQV6 1147 aa20.08■□□□□ 0.81
MRPS28-204ENST00000519120 CTCFP49711 727 aaPredicted RBP20.07■□□□□ 0.8
MRPS28-204ENST00000519120 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
MRPS28-204ENST00000519120 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
MRPS28-204ENST00000519120 GMLQ99445 158 aa20.07■□□□□ 0.8
MRPS28-204ENST00000519120 ANKRD2Q9GZV1 360 aa20.07■□□□□ 0.8
MRPS28-204ENST00000519120 USP17L3A6NCW0 530 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 USP17L4A6NCW7 530 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 EGFRP00533 1210 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 KIF4BQ2VIQ3 1234 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 USP17L1Q7RTZ2 530 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
MRPS28-204ENST00000519120 SPEF2Q9C093 1822 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 F6X3S4 739 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 MAP2K2P36507 400 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 DCPSQ96C86 337 aaKnown RBP20.05■□□□□ 0.8
MRPS28-204ENST00000519120 COA1Q9GZY4 146 aa20.05■□□□□ 0.8
MRPS28-204ENST00000519120 ANKRD18BA2A2Z9 1011 aa20.04■□□□□ 0.8
MRPS28-204ENST00000519120 ALDH1L1O75891 902 aa20.04■□□□□ 0.8
MRPS28-204ENST00000519120 MMP14P50281 582 aa20.04■□□□□ 0.8
MRPS28-204ENST00000519120 FOXO4P98177 505 aa20.04■□□□□ 0.8
MRPS28-204ENST00000519120 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
MRPS28-204ENST00000519120 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms