RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 HOXD8P13378 290 aaPredicted RBP7.02□□□□□ -1.29
SKP1-205ENST00000519054 COL8A1P27658 744 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 USP5P45974 858 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 COL9A3Q14050 684 aaPredicted RBP7.02□□□□□ -1.29
SKP1-205ENST00000519054 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
SKP1-205ENST00000519054 TMEM151AQ8N4L1 468 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 SMG9Q9H0W8 520 aaKnown RBP7.02□□□□□ -1.29
SKP1-205ENST00000519054 CNTN3Q9P232 1028 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 BRPF3Q9ULD4 1205 aa7.02□□□□□ -1.29
SKP1-205ENST00000519054 GHRHP01286 108 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 NID1P14543 1247 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 AFF1P51825 1210 aaKnown RBP7.01□□□□□ -1.29
SKP1-205ENST00000519054 HYAL2Q12891 473 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 XKR5Q6UX68 686 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 GJD3Q8N144 294 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 C1orf127Q8N9H9 656 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 NOP53Q9NZM5 478 aaKnown RBP7.01□□□□□ -1.29
SKP1-205ENST00000519054 KANSL3Q9P2N6 904 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
SKP1-205ENST00000519054 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
SKP1-205ENST00000519054 NDUFB5O43674 189 aa7□□□□□ -1.29
SKP1-205ENST00000519054 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
SKP1-205ENST00000519054 EHHADHQ08426 723 aa7□□□□□ -1.29
SKP1-205ENST00000519054 KCNA1Q09470 495 aa7□□□□□ -1.29
SKP1-205ENST00000519054 PLD4Q96BZ4 506 aa7□□□□□ -1.29
SKP1-205ENST00000519054 DCAF5Q96JK2 942 aa7□□□□□ -1.29
SKP1-205ENST00000519054 RBSNQ9H1K0 784 aa7□□□□□ -1.29
SKP1-205ENST00000519054 FRRS1LQ9P0K9 344 aa7□□□□□ -1.29
SKP1-205ENST00000519054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7□□□□□ -1.29
SKP1-205ENST00000519054 TNFRSF21O75509 655 aa6.99□□□□□ -1.29
SKP1-205ENST00000519054 CES1P23141 567 aa6.99□□□□□ -1.29
SKP1-205ENST00000519054 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
SKP1-205ENST00000519054 NCAPG2Q86XI2 1143 aa6.99□□□□□ -1.29
SKP1-205ENST00000519054 SPACA7Q96KW9 195 aa6.99□□□□□ -1.29
SKP1-205ENST00000519054 FOXD3Q9UJU5 478 aaPredicted RBP6.99□□□□□ -1.29
SKP1-205ENST00000519054 SPDYE3A6NKU9 549 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 FAM229AH3BQW9 127 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 PHACTR2O75167 634 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 KIF4AO95239 1232 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 ATP11AP98196 1134 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 GRIK5Q16478 980 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
SKP1-205ENST00000519054 KRBA1A5PL33 1030 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 GDF6Q6KF10 455 aaPredicted RBP6.97□□□□□ -1.29
SKP1-205ENST00000519054 AEBP1Q8IUX7 1158 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
SKP1-205ENST00000519054 KCTD17Q8N5Z5 321 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 TMC1Q8TDI8 760 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 SNX29Q8TEQ0 813 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 TTC9Q92623 222 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
SKP1-205ENST00000519054 EREGO14944 169 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 ACPPP15309 386 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 PRRT3Q5FWE3 981 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 ALYREFQ86V81 257 aaKnown RBP6.96□□□□□ -1.3
SKP1-205ENST00000519054 WFDC8Q8IUA0 241 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 SALL4Q9UJQ4 1053 aa6.96□□□□□ -1.3
SKP1-205ENST00000519054 SPATA31C1P0DKV0 1188 aa6.95□□□□□ -1.3
SKP1-205ENST00000519054 TRIM28Q13263 835 aaKnown RBP6.95□□□□□ -1.3
SKP1-205ENST00000519054 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
SKP1-205ENST00000519054 CEP120Q8N960 986 aa6.95□□□□□ -1.3
SKP1-205ENST00000519054 PMEPA1Q969W9 287 aa6.95□□□□□ -1.3
SKP1-205ENST00000519054 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 SMNDC1O75940 238 aaKnown RBP eCLIP6.94□□□□□ -1.3
SKP1-205ENST00000519054 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 PLA2G4EQ3MJ16 856 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 IL22RA1Q8N6P7 574 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 FAM129BQ96TA1 746 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 PBX4Q9BYU1 374 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 LACRTQ9GZZ8 138 aa6.94□□□□□ -1.3
SKP1-205ENST00000519054 PATL2C9JE40 543 aaKnown RBP6.93□□□□□ -1.3
SKP1-205ENST00000519054 GPR182O15218 404 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 TRPA1O75762 1119 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 POLR3DP05423 398 aaPredicted RBP6.93□□□□□ -1.3
SKP1-205ENST00000519054 MAPK1P28482 360 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 BAG6P46379 1132 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 RAC1P63000 192 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 DCTN4Q9UJW0 460 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 AMOTL2Q9Y2J4 779 aa6.93□□□□□ -1.3
SKP1-205ENST00000519054 ITGB2P05107 769 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 ORC1Q13415 861 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 GRIK4Q16099 956 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 GPAT2Q6NUI2 795 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 ILDR2Q71H61 639 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 NIF3L1Q9GZT8 377 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 DZANK1Q9NVP4 752 aa6.92□□□□□ -1.3
SKP1-205ENST00000519054 IGHA2P01877 340 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 EDN3P14138 238 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 CDC25BP30305 580 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 CHRNA4P43681 627 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 USPL1Q5W0Q7 1092 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms