RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
PCDHGA11-202ENST00000518882 TRIM5Q9C035 493 aa19.55■□□□□ 0.72
PCDHGA11-202ENST00000518882 SLFNL1Q499Z3 407 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 H3BQV1 296 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 RABL6Q3YEC7 729 aaPredicted RBP19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 MCMDC2Q4G0Z9 681 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 DRC7Q8IY82 874 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 HAUS7Q99871 368 aa19.54■□□□□ 0.72
PCDHGA11-202ENST00000518882 ADD1P35611 737 aaKnown RBP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 ZC3H6P61129 1189 aaKnown RBP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 FTOQ9C0B1 505 aaKnown RBP eCLIP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 RFX7Q2KHR2 1363 aa19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 ATP5J2-PTCD1G3V325 749 aa19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 CHAF1AQ13111 956 aaPredicted RBP19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 SMARCC2Q8TAQ2 1214 aa19.53■□□□□ 0.72
PCDHGA11-202ENST00000518882 PHKG2P15735 406 aa19.52■□□□□ 0.72
PCDHGA11-202ENST00000518882 FOSBP53539 338 aa19.52■□□□□ 0.72
PCDHGA11-202ENST00000518882 PRDM10Q9NQV6 1147 aa19.52■□□□□ 0.72
PCDHGA11-202ENST00000518882 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 SMAP1Q8IYB5 467 aaPredicted RBP19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 ZSCAN16Q9H4T2 348 aaPredicted RBP19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 PRDM4Q9UKN5 801 aa19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 CCDC144CPQ8IYA2 1237 aa19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
PCDHGA11-202ENST00000518882 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 MEGF6O75095 1541 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 A0A087WZG4 1122 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 CTIFO43310 598 aaKnown RBP19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 PFKFB2O60825 505 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 PPP4R3BQ5MIZ7 849 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 C11orf57Q6ZUT1 292 aaPredicted RBP19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 CACTINQ8WUQ7 758 aaKnown RBP19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 C16orf45Q96MC5 204 aaPredicted RBP19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 GOLPH3LQ9H4A5 285 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 CFAP45Q9UL16 551 aa19.5■□□□□ 0.71
PCDHGA11-202ENST00000518882 CASP7P55210 303 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 APOBRQ0VD83 1088 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 IQCB1Q15051 598 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 KBTBD3Q8NAB2 608 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 NLRP2Q9NX02 1062 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 CLIP2Q9UDT6 1046 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 SH3TC1Q8TE82 1336 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 PPFIA3O75145 1194 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 FGD1P98174 961 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 ATP2B3Q16720 1220 aa19.49■□□□□ 0.71
PCDHGA11-202ENST00000518882 SNRPA1P09661 255 aaKnown RBP19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 ANKRD7Q92527 254 aa19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 A0A087WWV3 80 aa19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 PTPDC1A2A3K4 754 aa19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 CCT2P78371 535 aaKnown RBP19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 LMBR1LQ6UX01 489 aa19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 LLPHQ9BRT6 129 aaKnown RBP19.48■□□□□ 0.71
PCDHGA11-202ENST00000518882 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 GOLIM4O00461 696 aa19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 SNW1Q13573 536 aaKnown RBP19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 CCAR1Q8IX12 1150 aaKnown RBP19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 NCOA5Q9HCD5 579 aaKnown RBP19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 RCOR1Q9UKL0 485 aa19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 PALLDQ8WX93 1383 aa19.47■□□□□ 0.71
PCDHGA11-202ENST00000518882 CBX1P83916 185 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 NAA16Q6N069 864 aaPredicted RBP19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 PDCL2Q8N4E4 241 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 GLI3P10071 1580 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 TATP17735 454 aaPredicted RBP19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 TTC5Q8N0Z6 440 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
PCDHGA11-202ENST00000518882 CDC25BP30305 580 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 FOXO4P98177 505 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 ARID5BQ14865 1188 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 ATG9AQ7Z3C6 839 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 AGXT2Q9BYV1 514 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 HMGB1P09429 215 aaKnown RBP19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 TIMM10P62072 90 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 NEUROD6Q96NK8 337 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 PAG1Q9NWQ8 432 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 SALL1Q9NSC2 1324 aa19.45■□□□□ 0.7
PCDHGA11-202ENST00000518882 CYP27B1O15528 508 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 CAVIN2O95810 425 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 TNNT1P13805 278 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 GUCY1B3Q02153 619 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 SARM1Q6SZW1 724 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
PCDHGA11-202ENST00000518882 ENGASEQ8NFI3 743 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms