RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 NUTM1Q86Y26 1132 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 PRKRIP1Q9H875 184 aaPredicted RBP12.66□□□□□ -0.38
TTC1-202ENST00000518560 RRAGCQ9HB90 399 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 ADAMTS8Q9UP79 889 aa12.66□□□□□ -0.38
TTC1-202ENST00000518560 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
TTC1-202ENST00000518560 PDIA6Q15084 440 aa12.65□□□□□ -0.38
TTC1-202ENST00000518560 STYK1Q6J9G0 422 aa12.65□□□□□ -0.38
TTC1-202ENST00000518560 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
TTC1-202ENST00000518560 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
TTC1-202ENST00000518560 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
TTC1-202ENST00000518560 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
TTC1-202ENST00000518560 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
TTC1-202ENST00000518560 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
TTC1-202ENST00000518560 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
TTC1-202ENST00000518560 TAF1P21675 1872 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 DPYSL4O14531 572 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 LCE2BO14633 110 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 TOMM70O94826 608 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
TTC1-202ENST00000518560 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 NPR1P16066 1061 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
TTC1-202ENST00000518560 HTRA3P83110 453 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 SUSD4Q5VX71 490 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 DDX12PQ92771 950 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
TTC1-202ENST00000518560 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
TTC1-202ENST00000518560 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
TTC1-202ENST00000518560 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
TTC1-202ENST00000518560 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
TTC1-202ENST00000518560 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
TTC1-202ENST00000518560 DDX60Q8IY21 1712 aaKnown RBP12.61□□□□□ -0.39
TTC1-202ENST00000518560 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
TTC1-202ENST00000518560 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
TTC1-202ENST00000518560 COL4A5P29400 1685 aa12.61□□□□□ -0.39
TTC1-202ENST00000518560 KLRG2A4D1S0 409 aaPredicted RBP12.6□□□□□ -0.39
TTC1-202ENST00000518560 CHL1O00533 1208 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 NTSR2O95665 410 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
TTC1-202ENST00000518560 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 SNED1Q8TER0 1413 aa12.6□□□□□ -0.39
TTC1-202ENST00000518560 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TTC1-202ENST00000518560 POTECB2RU33 542 aa12.59□□□□□ -0.39
TTC1-202ENST00000518560 CCDC93Q567U6 631 aa12.59□□□□□ -0.39
TTC1-202ENST00000518560 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
TTC1-202ENST00000518560 CHPF2Q9P2E5 772 aa12.59□□□□□ -0.39
TTC1-202ENST00000518560 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
TTC1-202ENST00000518560 RIC1Q4ADV7 1423 aa12.59□□□□□ -0.39
TTC1-202ENST00000518560 COL4A1P02462 1669 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 APAF1O14727 1248 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
TTC1-202ENST00000518560 MAP3K7O43318 606 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
TTC1-202ENST00000518560 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 ZNF541Q9H0D2 1346 aa12.58□□□□□ -0.4
TTC1-202ENST00000518560 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
TTC1-202ENST00000518560 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
TTC1-202ENST00000518560 APLP1P51693 650 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
TTC1-202ENST00000518560 NBR1Q14596 966 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 SOGA3Q5TF21 947 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 RPGRQ92834 1020 aaKnown RBP12.56□□□□□ -0.4
TTC1-202ENST00000518560 MTRQ99707 1265 aa12.56□□□□□ -0.4
TTC1-202ENST00000518560 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
TTC1-202ENST00000518560 SCN4AP35499 1836 aa12.55□□□□□ -0.4
TTC1-202ENST00000518560 LTBP1Q14766 1721 aa12.55□□□□□ -0.4
TTC1-202ENST00000518560 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
TTC1-202ENST00000518560 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
TTC1-202ENST00000518560 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
TTC1-202ENST00000518560 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 HCLS1P14317 486 aaPredicted RBP12.54□□□□□ -0.4
TTC1-202ENST00000518560 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 FSTL1Q12841 308 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 PPP1R42Q7Z4L9 355 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
TTC1-202ENST00000518560 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
TTC1-202ENST00000518560 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms