RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
PVT1-207ENST00000518528 GPSM2P81274 684 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 COPS6Q7L5N1 327 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
PVT1-207ENST00000518528 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 MAPK8IP3Q9UPT6 1336 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 UBE2Q2LH0YL09 131 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 ALDH1A1P00352 501 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 USP17L8P0C7I0 530 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 RPS8P62241 208 aaKnown RBP11.67□□□□□ -0.54
PVT1-207ENST00000518528 PDIA6Q15084 440 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 SF3B3Q15393 1217 aaKnown RBP11.67□□□□□ -0.54
PVT1-207ENST00000518528 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
PVT1-207ENST00000518528 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 TBC1D16Q8TBP0 767 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
PVT1-207ENST00000518528 UFL1O94874 794 aa11.66□□□□□ -0.54
PVT1-207ENST00000518528 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
PVT1-207ENST00000518528 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
PVT1-207ENST00000518528 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
PVT1-207ENST00000518528 MYOZ2Q9NPC6 264 aa11.66□□□□□ -0.54
PVT1-207ENST00000518528 GGA1Q9UJY5 639 aa11.66□□□□□ -0.54
PVT1-207ENST00000518528 ASTN2O75129 1339 aaPredicted RBP11.65□□□□□ -0.54
PVT1-207ENST00000518528 ANXA1P04083 346 aa11.65□□□□□ -0.54
PVT1-207ENST00000518528 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
PVT1-207ENST00000518528 OGFOD1Q8N543 542 aa11.65□□□□□ -0.54
PVT1-207ENST00000518528 CFHR5Q9BXR6 569 aa11.65□□□□□ -0.54
PVT1-207ENST00000518528 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
PVT1-207ENST00000518528 NUP98P52948 1817 aa11.65□□□□□ -0.55
PVT1-207ENST00000518528 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
PVT1-207ENST00000518528 INHBEP58166 350 aa11.64□□□□□ -0.55
PVT1-207ENST00000518528 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
PVT1-207ENST00000518528 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 IRS4O14654 1257 aaPredicted RBP11.63□□□□□ -0.55
PVT1-207ENST00000518528 LMOD3Q0VAK6 560 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
PVT1-207ENST00000518528 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 PODNQ7Z5L7 613 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 TRIM17Q9Y577 477 aa11.63□□□□□ -0.55
PVT1-207ENST00000518528 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 ZNF609O15014 1411 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 MANSC4A6NHS7 340 aaPredicted RBP11.62□□□□□ -0.55
PVT1-207ENST00000518528 MMP14P50281 582 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
PVT1-207ENST00000518528 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 OTUD7BQ6GQQ9 843 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 ERO1AQ96HE7 468 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 GMLQ99445 158 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 ISCA1Q9BUE6 129 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
PVT1-207ENST00000518528 XDHP47989 1333 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 FXR1P51114 621 aaKnown RBP eCLIP11.6□□□□□ -0.55
PVT1-207ENST00000518528 RIPK4P57078 832 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
PVT1-207ENST00000518528 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
PVT1-207ENST00000518528 ARHGEF6Q15052 776 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
PVT1-207ENST00000518528 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 APOBEC3FQ8IUX4 373 aaKnown RBP11.6□□□□□ -0.55
PVT1-207ENST00000518528 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
PVT1-207ENST00000518528 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
PVT1-207ENST00000518528 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
PVT1-207ENST00000518528 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
PVT1-207ENST00000518528 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
PVT1-207ENST00000518528 PRKG1Q13976 671 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 IFNL1Q8IU54 200 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
PVT1-207ENST00000518528 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 R3HDMLQ9H3Y0 253 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 HYPKQ9NX55 129 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 ANGEL1Q9UNK9 670 aaKnown RBP11.58□□□□□ -0.56
PVT1-207ENST00000518528 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
PVT1-207ENST00000518528 PTPN22Q9Y2R2 807 aa11.58□□□□□ -0.56
PVT1-207ENST00000518528 KDM3BQ7LBC6 1761 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 WNT10BO00744 389 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 PPP1R12BO60237 982 aaPredicted RBP11.57□□□□□ -0.56
PVT1-207ENST00000518528 HOXB7P09629 217 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
PVT1-207ENST00000518528 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms