RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 ELP1O95163 1332 aa22.21■■□□□ 1.15
NKX2-1-203ENST00000518149 VPS53Q5VIR6 699 aa22.21■■□□□ 1.15
NKX2-1-203ENST00000518149 KRT222Q8N1A0 295 aa22.21■■□□□ 1.15
NKX2-1-203ENST00000518149 TERF2Q15554 542 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 CEP135Q66GS9 1140 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 POTEAQ6S8J7 498 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 CWC27Q6UX04 472 aaKnown RBP22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 TDRD7Q8NHU6 1098 aaKnown RBP22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 USP44Q9H0E7 712 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 ITGB4P16144 1822 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 DOT1LQ8TEK3 1739 aa22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 ZNF397Q8NF99 534 aaPredicted RBP22.2■■□□□ 1.14
NKX2-1-203ENST00000518149 RAB11FIP3O75154 756 aa22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 CACTINQ8WUQ7 758 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 ZNF592Q92610 1267 aa22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 JAKMIP1Q96N16 626 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 RBM6P78332 1123 aaKnown RBP22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 DACT1Q9NYF0 836 aa22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 CLIP2Q9UDT6 1046 aa22.19■■□□□ 1.14
NKX2-1-203ENST00000518149 CCDC66A2RUB6 948 aa22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 ST3GAL1Q11201 340 aa22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 LARP1BQ659C4 914 aaKnown RBP22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
NKX2-1-203ENST00000518149 DDX19AQ9NUU7 478 aaKnown RBP22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 CYP46A1Q9Y6A2 500 aa22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 CCDC171Q6TFL3 1326 aa22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 BCL9O00512 1426 aa22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 SURF6O75683 361 aaKnown RBP22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
NKX2-1-203ENST00000518149 GOLGA6L4A6NEF3 574 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 ANXA1P04083 346 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 ME3Q16798 604 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 FERMT3Q86UX7 667 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 RHPN1Q8TCX5 695 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 CHMP4AQ9BY43 222 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 RXRBP28702 533 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 ADCK5Q3MIX3 580 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 CCDC144BQ3MJ40 725 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 KMT5BQ4FZB7 885 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 RBM43Q6ZSC3 357 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 CDC37L1Q7L3B6 337 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 CCDC144CPQ8IYA2 1237 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 NECAB1Q8N987 351 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 ZSWIM6Q9HCJ5 1215 aa22.16■■□□□ 1.14
NKX2-1-203ENST00000518149 FAM173BQ6P4H8 233 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 TM6SF1Q9BZW5 370 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 CLSTN2Q9H4D0 955 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 PDIA4P13667 645 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 CDC25BP30305 580 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 PIP4K2AP48426 406 aaPredicted RBP22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 ZNF165P49910 485 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 PPP1R42Q7Z4L9 355 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
NKX2-1-203ENST00000518149 PRPF40BQ6NWY9 871 aaKnown RBP22.14■■□□□ 1.14
NKX2-1-203ENST00000518149 FMNL2Q96PY5 1086 aa22.14■■□□□ 1.14
NKX2-1-203ENST00000518149 USP16Q9Y5T5 823 aa22.14■■□□□ 1.14
NKX2-1-203ENST00000518149 N4BP2Q86UW6 1770 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 SCAND2PQ9GZW5 306 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 ZNF215Q9UL58 517 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 PXDNLA1KZ92 1463 aa22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 BRWD3Q6RI45 1802 aa22.14■■□□□ 1.13
NKX2-1-203ENST00000518149 SPATA32Q96LK8 384 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 DNAJC25Q9H1X3 360 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 ZBTB22O15209 634 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 PTH1RQ03431 593 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 RUFY2Q8WXA3 655 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 KIF1BPQ96EK5 621 aa22.13■■□□□ 1.13
NKX2-1-203ENST00000518149 SRGAP3O43295 1099 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 PDCP20941 246 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 KRT27Q7Z3Y8 459 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 LRRC8AQ8IWT6 810 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 FAM53CQ9NYF3 392 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 KCNJ4P48050 445 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 PTPN14Q15678 1187 aa22.12■■□□□ 1.13
NKX2-1-203ENST00000518149 POLA2Q14181 598 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 NEMFO60524 1076 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 KCNB2Q92953 911 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 TPCN1Q9ULQ1 816 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 V9GYY5 206 aaPredicted RBP22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 C5P01031 1676 aa22.11■■□□□ 1.13
NKX2-1-203ENST00000518149 USP27XA6NNY8 438 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 FBXO38Q6PIJ6 1188 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 NYAP1Q6ZVC0 841 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 DNAAF4Q8WXU2 420 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 SLC4A9Q96Q91 983 aa22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 TFIP11Q9UBB9 837 aaKnown RBP22.1■■□□□ 1.13
NKX2-1-203ENST00000518149 PI4KAP2A4QPH2 592 aa22.09■■□□□ 1.13
NKX2-1-203ENST00000518149 CDK11BP21127 795 aaKnown RBP22.09■■□□□ 1.13
NKX2-1-203ENST00000518149 PI4KAP1Q8N8J0 262 aa22.09■■□□□ 1.13
NKX2-1-203ENST00000518149 LEO1Q8WVC0 666 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms