RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 NPHS2Q9NP85 383 aa5.28□□□□□ -1.56
RNU6-390P-201ENST00000516259 ST8SIA5O15466 376 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 RARAP10276 462 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 TARSP26639 723 aaKnown RBP5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 GPLD1P80108 840 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 GRM2Q14416 872 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 RPS26P11Q5JNZ5 115 aaPredicted RBP5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 PEAR1Q5VY43 1037 aaPredicted RBP5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 HS2ST1Q7LGA3 356 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 CEP120Q8N960 986 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 ARMC5Q96C12 935 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 DRC1Q96MC2 740 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 TRERF1Q96PN7 1200 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 PNMA5Q96PV4 448 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 GMLQ99445 158 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 BHLHE41Q9C0J9 482 aaPredicted RBP5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 ZFATQ9P243 1243 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 HCN2Q9UL51 889 aa5.27□□□□□ -1.57
RNU6-390P-201ENST00000516259 DCDC2BA2VCK2 349 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 SIN3BO75182 1162 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 USP17L7P0C7H9 530 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 FGFR3P22607 806 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 ITPKAP23677 461 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 PWP1Q13610 501 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 NXPE4Q6UWF7 544 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 ERMP1Q7Z2K6 904 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 CCNJLQ8IV13 435 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 ZNF654Q8IZM8 581 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 C3orf58Q8NDZ4 430 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 RSRP1Q9BUV0 290 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 STRN4Q9NRL3 753 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 CUEDC1Q9NWM3 386 aaPredicted RBP5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 DACH1Q9UI36 760 aa5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 DDX41Q9UJV9 622 aaKnown RBP5.26□□□□□ -1.57
RNU6-390P-201ENST00000516259 TMEM238LA0A1B0GVL6 79 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 IGSF3O75054 1194 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 GADD45BO75293 160 aaPredicted RBP5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 NFKB1P19838 968 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 IRS1P35568 1242 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 ZNF468Q5VIY5 522 aaPredicted RBP5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 PI16Q6UXB8 463 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 SV2BQ7L1I2 683 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 DHX32Q7L7V1 743 aaKnown RBP5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 CACTIN-AS1Q8N1I8 211 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 TMEM102Q8N9M5 508 aaPredicted RBP5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 TNFRSF25Q93038 417 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 SPATA32Q96LK8 384 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 TCF12Q99081 682 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 IRX2Q9BZI1 471 aaPredicted RBP5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 EHD4Q9H223 541 aa5.25□□□□□ -1.57
RNU6-390P-201ENST00000516259 ADARB2-AS1A8MUL3 147 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 NFKBIEO00221 500 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 EIF4EBP3O60516 100 aaPredicted RBP5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 PPFIA3O75145 1194 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 CYP2E1P05181 493 aaPredicted RBP5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 GNL2Q13823 731 aaKnown RBP5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 TTC9Q92623 222 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 ABHD17AQ96GS6 310 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 SLC30A3Q99726 388 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 MDFIQ99750 246 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 TINF2Q9BSI4 451 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 CEP44Q9C0F1 390 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 SRA1Q9HD15 236 aaKnown RBP5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 ABCB6Q9NP58 842 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 DZANK1Q9NVP4 752 aa5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.24□□□□□ -1.57
RNU6-390P-201ENST00000516259 LOC102724428A0A0B4J2F2 783 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 SOBPA7XYQ1 873 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 POLR3DP05423 398 aaPredicted RBP5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 SIK1P57059 783 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 SCARA3Q6AZY7 606 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 SV2AQ7L0J3 742 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 NCAPG2Q86XI2 1143 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 UBXN4Q92575 508 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 GTPBP3Q969Y2 492 aaKnown RBP5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 SPACA7Q96KW9 195 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 CCSER2Q9H7U1 834 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 LIN7BQ9HAP6 207 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 KCNQ5Q9NR82 932 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 FRRS1LQ9P0K9 344 aa5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 GMPR2Q9P2T1 348 aaKnown RBP5.23□□□□□ -1.57
RNU6-390P-201ENST00000516259 ARAFP10398 606 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 CD33P20138 364 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 GJA8P48165 433 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 USP48Q86UV5 1035 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 RASGRP4Q8TDF6 673 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 BHMTQ93088 406 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 NXPE3Q969Y0 559 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 CNTNAP3BQ96NU0 1288 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 OSMRQ99650 979 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 ZKSCAN3Q9BRR0 538 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 PBX4Q9BYU1 374 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 CNTNAP3Q9BZ76 1288 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 RBSNQ9H1K0 784 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 GGT7Q9UJ14 662 aa5.22□□□□□ -1.57
RNU6-390P-201ENST00000516259 VSIG8P0DPA2 414 aa5.21□□□□□ -1.58
RNU6-390P-201ENST00000516259 MAP2K3P46734 347 aa5.21□□□□□ -1.58
RNU6-390P-201ENST00000516259 RPS26P62854 115 aaKnown RBP5.21□□□□□ -1.58
RNU6-390P-201ENST00000516259 CTBSQ01459 385 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms