RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 RNF112Q9ULX5 631 aa6.63□□□□□ -1.35
HERC4-215ENST00000515753 NOVA2Q9UNW9 492 aaKnown RBP6.63□□□□□ -1.35
HERC4-215ENST00000515753 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
HERC4-215ENST00000515753 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
HERC4-215ENST00000515753 F8W735 103 aaPredicted RBP6.61□□□□□ -1.35
HERC4-215ENST00000515753 SETDB1Q15047 1291 aa6.61□□□□□ -1.35
HERC4-215ENST00000515753 TRIP4Q15650 581 aaPredicted RBP6.61□□□□□ -1.35
HERC4-215ENST00000515753 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
HERC4-215ENST00000515753 DZIP1LQ8IYY4 767 aaKnown RBP6.61□□□□□ -1.35
HERC4-215ENST00000515753 MRPL18Q9H0U6 180 aaKnown RBP6.61□□□□□ -1.35
HERC4-215ENST00000515753 FSTP19883 344 aa6.6□□□□□ -1.35
HERC4-215ENST00000515753 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
HERC4-215ENST00000515753 RBSNQ9H1K0 784 aa6.6□□□□□ -1.35
HERC4-215ENST00000515753 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
HERC4-215ENST00000515753 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 GLB1P16278 677 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 CDC25BP30305 580 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 SSTR4P31391 388 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
HERC4-215ENST00000515753 COL13A1Q5TAT6 717 aaPredicted RBP6.59□□□□□ -1.35
HERC4-215ENST00000515753 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 NLRP13Q86W25 1043 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
HERC4-215ENST00000515753 UBAP1LF5GYI3 381 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 LINC01387J3KSC0 135 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
HERC4-215ENST00000515753 SOX18P35713 384 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 ATP11AP98196 1134 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 OCLNQ16625 522 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 CCDC97Q96F63 343 aaPredicted RBP6.58□□□□□ -1.36
HERC4-215ENST00000515753 LACRTQ9GZZ8 138 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 ZMIZ1Q9ULJ6 1067 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
HERC4-215ENST00000515753 SRPK2P78362 688 aaKnown RBP6.57□□□□□ -1.36
HERC4-215ENST00000515753 ADAMTSL4Q6UY14 1074 aa6.57□□□□□ -1.36
HERC4-215ENST00000515753 STK32AQ8WU08 396 aa6.57□□□□□ -1.36
HERC4-215ENST00000515753 UBL7Q96S82 380 aaPredicted RBP6.57□□□□□ -1.36
HERC4-215ENST00000515753 ACIN1Q9UKV3 1341 aaKnown RBP6.56□□□□□ -1.36
HERC4-215ENST00000515753 TNFRSF10BO14763 440 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 WISP1O95388 367 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 HOXD8P13378 290 aaPredicted RBP6.56□□□□□ -1.36
HERC4-215ENST00000515753 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 ELOAQ14241 798 aaKnown RBP6.56□□□□□ -1.36
HERC4-215ENST00000515753 SWI5Q1ZZU3 235 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 CEP135Q66GS9 1140 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 C1orf115Q9H7X2 142 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 KCNK4Q9NYG8 393 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 TIMELESSQ9UNS1 1208 aa6.56□□□□□ -1.36
HERC4-215ENST00000515753 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.55□□□□□ -1.36
HERC4-215ENST00000515753 MAP4K3Q8IVH8 894 aa6.55□□□□□ -1.36
HERC4-215ENST00000515753 GPR152Q8TDT2 470 aa6.55□□□□□ -1.36
HERC4-215ENST00000515753 PIK3R5Q8WYR1 880 aa6.55□□□□□ -1.36
HERC4-215ENST00000515753 SRA1Q9HD15 236 aaKnown RBP6.55□□□□□ -1.36
HERC4-215ENST00000515753 RAXQ9Y2V3 346 aa6.55□□□□□ -1.36
HERC4-215ENST00000515753 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 ZBTB39O15060 712 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 MED26O95402 600 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 CYP2E1P05181 493 aaPredicted RBP6.54□□□□□ -1.36
HERC4-215ENST00000515753 SCNN1AP37088 669 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 ZAP70P43403 619 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 HYAL2Q12891 473 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 Q6ZS46 218 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 ACAD11Q709F0 780 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 SPACA7Q96KW9 195 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 RASSF4Q9H2L5 321 aa6.54□□□□□ -1.36
HERC4-215ENST00000515753 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 PTCD1O75127 700 aaKnown RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 ATG7O95352 703 aa6.53□□□□□ -1.36
HERC4-215ENST00000515753 TGFB1P01137 390 aa6.53□□□□□ -1.36
HERC4-215ENST00000515753 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
HERC4-215ENST00000515753 MUC3BQ9H195 1237 aa6.53□□□□□ -1.36
HERC4-215ENST00000515753 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
HERC4-215ENST00000515753 STOML1Q9UBI4 398 aa6.53□□□□□ -1.36
HERC4-215ENST00000515753 BTBD11A6QL63 1104 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 SMNDC1O75940 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC4-215ENST00000515753 IGLV1-40P01703 118 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 CDC27P30260 824 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 CD97P48960 835 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 MCTP1Q6DN14 999 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 ARMC10Q8N2F6 343 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 DCAF11Q8TEB1 546 aa6.52□□□□□ -1.37
HERC4-215ENST00000515753 CXXC1Q9P0U4 656 aaPredicted RBP6.52□□□□□ -1.37
HERC4-215ENST00000515753 SLC51AQ86UW1 340 aa6.51□□□□□ -1.37
HERC4-215ENST00000515753 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
HERC4-215ENST00000515753 COL26A1Q96A83 441 aa6.51□□□□□ -1.37
HERC4-215ENST00000515753 FAM13BQ9NYF5 915 aa6.51□□□□□ -1.37
HERC4-215ENST00000515753 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.51□□□□□ -1.37
HERC4-215ENST00000515753 TM4SF5O14894 197 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 FSCN2O14926 492 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 DHX15O43143 795 aaKnown RBP6.5□□□□□ -1.37
HERC4-215ENST00000515753 PPP1R15AO75807 674 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms