RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	IFT122	Q9HBG6	1241 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TYW1	Q9NV66	732 aa	Known RBP	5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	FANCL	Q9NW38	375 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	VTI1B	Q9UEU0	232 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PRKAB1	Q9Y478	270 aa		5.14	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L15	C9J2P7	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L10	C9JJH3	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L13	C9JLJ4	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L12	C9JPN9	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L11	C9JVI0	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L21	D6R901	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L18	D6R9N7	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L22	D6RA61	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L17	D6RBQ6	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L19	D6RCP7	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L20	D6RJB6	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CBFA2T2	O43439	604 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	HCLS1	P14317	486 aa	Predicted RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TRAPPC10	P48553	1259 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L24	Q0WX57	530 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PPP2R5A	Q15172	486 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SLC4A8	Q2Y0W8	1093 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CCDC93	Q567U6	631 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CHPF	Q8IZ52	775 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PDCD7	Q8N8D1	485 aa	Known RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NGLY1	Q96IV0	654 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SRPK1	Q96SB4	655 aa	Known RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CEP126	Q9P2H0	1117 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PARP2	Q9UGN5	583 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ANAPC4	Q9UJX5	808 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NOL7	Q9UMY1	257 aa	Known RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	C1orf167	Q5SNV9	1468 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	BICDL2	A1A5D9	508 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	MAP3K7	O43318	606 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SLC26A4	O43511	780 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CAND2	O75155	1236 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	FGR	P09769	529 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	FAM200B	P0CF97	657 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PLEKHG4	Q58EX7	1191 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	EGFL6	Q8IUX8	553 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ORAI2	Q96SN7	254 aa		5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SLK	Q9H2G2	1235 aa	Predicted RBP	5.13	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L3	A6NCW0	530 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L4	A6NCW7	530 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SORBS3	O60504	671 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PRMT3	O60678	531 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CDC45	O75419	566 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RGS20	O76081	388 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TGFB3	P10600	412 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CDKN1C	P49918	316 aa	Predicted RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CLCN6	P51797	869 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RACK1	P63244	317 aa	Known RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	VPS72	Q15906	364 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ALDH1L2	Q3SY69	923 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CCDC92	Q53HC0	331 aa	Predicted RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L2	Q6R6M4	530 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP17L1	Q7RTZ2	530 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ZSCAN30	Q86W11	494 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CCDC89	Q8N998	374 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SOS2	Q07890	1332 aa	Predicted RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SPHKAP	Q2M3C7	1700 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NALCN	Q8IZF0	1738 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NEXMIF	Q5QGS0	1516 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ICMT	O60725	284 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RGL3	Q3MIN7	710 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PPARGC1B	Q86YN6	1023 aa	Known RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	JAML	Q86YT9	394 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RGL4	Q8IZJ4	473 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	MYRIP	Q8NFW9	859 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	C12orf49	Q9H741	205 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ENAM	Q9NRM1	1142 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	METTL5	Q9NRN9	209 aa	Known RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	MRPS23	Q9Y3D9	190 aa	Known RBP	5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ROBO2	Q9HCK4	1378 aa		5.12	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PRSS47	A8MTI9	375 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	TSPAN6	O43657	245 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	MYL1	P05976	194 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CHMP4BP1	P59074	171 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ARHGAP4	P98171	946 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SF3B2	Q13435	895 aa	Known RBP	5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	NBPF9	Q3BBW0	867 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	INO80D	Q53TQ3	878 aa	Predicted RBP	5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	ARMC3	Q5W041	872 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	RPAIN	Q86UA6	219 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CEP120	Q8N960	986 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	DUSP9	Q99956	384 aa	Known RBP	5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	USP21	Q9UK80	565 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	PCDHB15	Q9Y5E8	787 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	CLTCL1	P53675	1640 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	COL6A1	P12109	1028 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	IRX5	P78411	483 aa	Predicted RBP	5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	GRAMD1B	Q3KR37	738 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	DPY19L2	Q6NUT2	758 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	SLC4A10	Q6U841	1118 aa		5.11	□□□□□ -1.59
SLC38A9-223	ENST00000515629	C14orf80	Q86SX3	495 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms