RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SOX18P35713 384 aa8.34□□□□□ -1.07
LINC01088-211ENST00000515597 NLRP13Q86W25 1043 aa8.34□□□□□ -1.07
LINC01088-211ENST00000515597 IL22RA1Q8N6P7 574 aa8.34□□□□□ -1.07
LINC01088-211ENST00000515597 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
LINC01088-211ENST00000515597 ALX3O95076 343 aa8.33□□□□□ -1.08
LINC01088-211ENST00000515597 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
LINC01088-211ENST00000515597 RBSNQ9H1K0 784 aa8.33□□□□□ -1.08
LINC01088-211ENST00000515597 ATG7O95352 703 aa8.32□□□□□ -1.08
LINC01088-211ENST00000515597 ZAP70P43403 619 aa8.32□□□□□ -1.08
LINC01088-211ENST00000515597 COL13A1Q5TAT6 717 aaPredicted RBP8.32□□□□□ -1.08
LINC01088-211ENST00000515597 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
LINC01088-211ENST00000515597 LRP8Q14114 963 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 OR13H1Q8NG92 308 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 ZMYND15Q9H091 742 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 AKTIPQ9H8T0 292 aa8.31□□□□□ -1.08
LINC01088-211ENST00000515597 ZBTB39O15060 712 aa8.3□□□□□ -1.08
LINC01088-211ENST00000515597 ATP11AP98196 1134 aa8.3□□□□□ -1.08
LINC01088-211ENST00000515597 PSMG3-AS1Q96PY0 264 aa8.3□□□□□ -1.08
LINC01088-211ENST00000515597 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
LINC01088-211ENST00000515597 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
LINC01088-211ENST00000515597 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
LINC01088-211ENST00000515597 AGGF1Q8N302 714 aaeCLIP8.29□□□□□ -1.08
LINC01088-211ENST00000515597 LACRTQ9GZZ8 138 aa8.29□□□□□ -1.08
LINC01088-211ENST00000515597 PTCD1O75127 700 aaKnown RBP8.28□□□□□ -1.08
LINC01088-211ENST00000515597 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
LINC01088-211ENST00000515597 PRR23CQ6ZRP0 262 aa8.28□□□□□ -1.08
LINC01088-211ENST00000515597 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
LINC01088-211ENST00000515597 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
LINC01088-211ENST00000515597 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
LINC01088-211ENST00000515597 STIM2Q9P246 746 aa8.28□□□□□ -1.08
LINC01088-211ENST00000515597 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-211ENST00000515597 HYAL2Q12891 473 aa8.27□□□□□ -1.09
LINC01088-211ENST00000515597 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
LINC01088-211ENST00000515597 DZIP1LQ8IYY4 767 aaKnown RBP8.27□□□□□ -1.09
LINC01088-211ENST00000515597 SRA1Q9HD15 236 aaKnown RBP8.27□□□□□ -1.09
LINC01088-211ENST00000515597 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
LINC01088-211ENST00000515597 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
LINC01088-211ENST00000515597 CDC25BP30305 580 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 TTC39BQ5VTQ0 682 aaPredicted RBP8.26□□□□□ -1.09
LINC01088-211ENST00000515597 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 MAP4K3Q8IVH8 894 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 GALNT11Q8NCW6 608 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 RASSF4Q9H2L5 321 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 PPME1Q9Y570 386 aa8.26□□□□□ -1.09
LINC01088-211ENST00000515597 WISP1O95388 367 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 GLB1P16278 677 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 SCNN1AP37088 669 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 ATCAYQ86WG3 371 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 PBXIP1Q96AQ6 731 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
LINC01088-211ENST00000515597 FNDC3AQ9Y2H6 1198 aaKnown RBP8.25□□□□□ -1.09
LINC01088-211ENST00000515597 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC01088-211ENST00000515597 Q6ZS46 218 aa8.24□□□□□ -1.09
LINC01088-211ENST00000515597 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.24□□□□□ -1.09
LINC01088-211ENST00000515597 ABTB2Q8N961 1025 aa8.24□□□□□ -1.09
LINC01088-211ENST00000515597 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
LINC01088-211ENST00000515597 CARD10Q9BWT7 1032 aa8.24□□□□□ -1.09
LINC01088-211ENST00000515597 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
LINC01088-211ENST00000515597 FSTP19883 344 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 CDC27P30260 824 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 NUDT16Q96DE0 195 aaKnown RBP8.23□□□□□ -1.09
LINC01088-211ENST00000515597 MUC3BQ9H195 1237 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 KCNK4Q9NYG8 393 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 KANSL3Q9P2N6 904 aa8.23□□□□□ -1.09
LINC01088-211ENST00000515597 KIF4AO95239 1232 aa8.22□□□□□ -1.09
LINC01088-211ENST00000515597 CACTIN-AS1Q8N1I8 211 aa8.22□□□□□ -1.09
LINC01088-211ENST00000515597 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
LINC01088-211ENST00000515597 RNF112Q9ULX5 631 aa8.22□□□□□ -1.09
LINC01088-211ENST00000515597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
LINC01088-211ENST00000515597 EPHA1P21709 976 aa8.21□□□□□ -1.1
LINC01088-211ENST00000515597 ACAD11Q709F0 780 aa8.21□□□□□ -1.1
LINC01088-211ENST00000515597 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
LINC01088-211ENST00000515597 UBL7Q96S82 380 aaPredicted RBP8.21□□□□□ -1.1
LINC01088-211ENST00000515597 ELP3Q9H9T3 547 aa8.21□□□□□ -1.1
LINC01088-211ENST00000515597 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
LINC01088-211ENST00000515597 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 ACPPP15309 386 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 CD68P34810 354 aaPredicted RBP8.2□□□□□ -1.1
LINC01088-211ENST00000515597 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 CEP120Q8N960 986 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 PBX4Q9BYU1 374 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 CNTN3Q9P232 1028 aa8.2□□□□□ -1.1
LINC01088-211ENST00000515597 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
LINC01088-211ENST00000515597 TM4SF5O14894 197 aa8.19□□□□□ -1.1
LINC01088-211ENST00000515597 FSCN2O14926 492 aa8.19□□□□□ -1.1
LINC01088-211ENST00000515597 PDE12Q6L8Q7 609 aaKnown RBP8.19□□□□□ -1.1
LINC01088-211ENST00000515597 EDEM1Q92611 657 aa8.19□□□□□ -1.1
LINC01088-211ENST00000515597 A6NHS1 94 aa8.18□□□□□ -1.1
LINC01088-211ENST00000515597 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
LINC01088-211ENST00000515597 PTPRAP18433 802 aa8.18□□□□□ -1.1
LINC01088-211ENST00000515597 UBASH3BQ8TF42 649 aa8.18□□□□□ -1.1
LINC01088-211ENST00000515597 FOXD4L4Q8WXT5 416 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms