RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 JPH1Q9HDC5 661 aaPredicted RBP8.77□□□□□ -1.01
SMARCA5-203ENST00000515531 J3QW42 95 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 LILRB5O75023 590 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 NEFLP07196 543 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 CES1P23141 567 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 MAPK1P28482 360 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 DGKGP49619 791 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 TMEM151AQ8N4L1 468 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 C1orf127Q8N9H9 656 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 CNTN3Q9P232 1028 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 DCTN4Q9UJW0 460 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 STARD13Q9Y3M8 1113 aa8.76□□□□□ -1.01
SMARCA5-203ENST00000515531 PHACTR2O75167 634 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 TNFRSF21O75509 655 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 ALBP02768 609 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 SNX29Q8TEQ0 813 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 FRRS1LQ9P0K9 344 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
SMARCA5-203ENST00000515531 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 GNB5O14775 395 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 HOXD8P13378 290 aaPredicted RBP8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 PERM1Q5SV97 790 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 SMG9Q9H0W8 520 aaKnown RBP8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 KANSL3Q9P2N6 904 aa8.74□□□□□ -1.01
SMARCA5-203ENST00000515531 LINC00114Q6XXX2 140 aa8.73□□□□□ -1.01
SMARCA5-203ENST00000515531 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
SMARCA5-203ENST00000515531 C8orf86Q6ZUL3 223 aa8.73□□□□□ -1.01
SMARCA5-203ENST00000515531 FOXD3Q9UJU5 478 aaPredicted RBP8.73□□□□□ -1.01
SMARCA5-203ENST00000515531 HOXB4P17483 251 aaPredicted RBP8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 COL13A1Q5TAT6 717 aaPredicted RBP8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 DMRTB1Q96MA1 342 aa8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 LPIN3Q9BQK8 851 aa8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 PRDM6Q9NQX0 595 aa8.72□□□□□ -1.01
SMARCA5-203ENST00000515531 KIF4AO95239 1232 aa8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 GDF11O95390 407 aa8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 IRS1P35568 1242 aa8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 ZFYVE28Q9HCC9 887 aa8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
SMARCA5-203ENST00000515531 SPDYE3A6NKU9 549 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 EREGO14944 169 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 SND1Q7KZF4 910 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 TTC9Q92623 222 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 PLVAPQ9BX97 442 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 NIF3L1Q9GZT8 377 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 CHRDQ9H2X0 955 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 SALL4Q9UJQ4 1053 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 AMOTL2Q9Y2J4 779 aa8.7□□□□□ -1.02
SMARCA5-203ENST00000515531 ZBTB7CA1YPR0 619 aa8.69□□□□□ -1.02
SMARCA5-203ENST00000515531 SMNDC1O75940 238 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMARCA5-203ENST00000515531 CEP135Q66GS9 1140 aa8.69□□□□□ -1.02
SMARCA5-203ENST00000515531 TMC7Q7Z402 723 aa8.69□□□□□ -1.02
SMARCA5-203ENST00000515531 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
SMARCA5-203ENST00000515531 GPR182O15218 404 aa8.68□□□□□ -1.02
SMARCA5-203ENST00000515531 EDN3P14138 238 aa8.68□□□□□ -1.02
SMARCA5-203ENST00000515531 TRAPPC3LQ5T215 181 aa8.68□□□□□ -1.02
SMARCA5-203ENST00000515531 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
SMARCA5-203ENST00000515531 CEP120Q8N960 986 aa8.68□□□□□ -1.02
SMARCA5-203ENST00000515531 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 IGHA1P01876 353 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 NID1P14543 1247 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 ATP11AP98196 1134 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 PLCB3Q01970 1234 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 RASSF7Q02833 373 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 ALKBH8Q96BT7 664 aaKnown RBP8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 PBX4Q9BYU1 374 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 RASSF4Q9H2L5 321 aa8.67□□□□□ -1.02
SMARCA5-203ENST00000515531 ORC1Q13415 861 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 MSL1Q68DK7 614 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 WFDC8Q8IUA0 241 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 CACTIN-AS1Q8N1I8 211 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 DNAJC25Q9H1X3 360 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 SUV39H2Q9H5I1 410 aa8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.66□□□□□ -1.02
SMARCA5-203ENST00000515531 POLR3DP05423 398 aaPredicted RBP8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 GRIK5Q16478 980 aa8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 PRRT3Q5FWE3 981 aa8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 IL22RA1Q8N6P7 574 aa8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
SMARCA5-203ENST00000515531 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 IGHA2P01877 340 aa8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 ALYREFQ86V81 257 aaKnown RBP8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 CSRNP1Q96S65 589 aa8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 OSMRQ99650 979 aa8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 TRIM33Q9UPN9 1127 aa8.64□□□□□ -1.03
SMARCA5-203ENST00000515531 RAC1P63000 192 aa8.63□□□□□ -1.03
SMARCA5-203ENST00000515531 USPL1Q5W0Q7 1092 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms