RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 EYA3Q99504 573 aa32.53■■■□□ 2.8
DDR1-279ENST00000515529 GPBP1L1Q9HC44 474 aaPredicted RBP32.53■■■□□ 2.8
DDR1-279ENST00000515529 GGA1Q9UJY5 639 aa32.53■■■□□ 2.8
DDR1-279ENST00000515529 XDHP47989 1333 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 AOC3Q16853 763 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 DPY19L2Q6NUT2 758 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 NIM1KQ8IY84 436 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 PODXL2Q9NZ53 605 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 MINPP1Q9UNW1 487 aa32.52■■■□□ 2.8
DDR1-279ENST00000515529 KDM2BQ8NHM5 1336 aa32.51■■■□□ 2.8
DDR1-279ENST00000515529 SPEF2Q9C093 1822 aa32.51■■■□□ 2.8
DDR1-279ENST00000515529 DICER1Q9UPY3 1922 aaKnown RBP32.51■■■□□ 2.8
DDR1-279ENST00000515529 UFL1O94874 794 aa32.51■■■□□ 2.79
DDR1-279ENST00000515529 LRRFIP2Q9Y608 721 aaKnown RBP32.51■■■□□ 2.79
DDR1-279ENST00000515529 WASHC4Q2M389 1173 aa32.5■■■□□ 2.79
DDR1-279ENST00000515529 LDHAL6AQ6ZMR3 332 aa32.5■■■□□ 2.79
DDR1-279ENST00000515529 TBC1D16Q8TBP0 767 aa32.5■■■□□ 2.79
DDR1-279ENST00000515529 ZNF594Q96JF6 807 aaPredicted RBP32.5■■■□□ 2.79
DDR1-279ENST00000515529 ANKRD2Q9GZV1 360 aa32.5■■■□□ 2.79
DDR1-279ENST00000515529 KIAA2012Q0VF49 1180 aa32.49■■■□□ 2.79
DDR1-279ENST00000515529 CNNM1Q9NRU3 951 aa32.49■■■□□ 2.79
DDR1-279ENST00000515529 POLLQ9UGP5 575 aa32.49■■■□□ 2.79
DDR1-279ENST00000515529 ATP2B4P23634 1241 aa32.48■■■□□ 2.79
DDR1-279ENST00000515529 RLBP1P12271 317 aa32.47■■■□□ 2.79
DDR1-279ENST00000515529 EIF6P56537 245 aaKnown RBP32.47■■■□□ 2.79
DDR1-279ENST00000515529 DUOX1Q9NRD9 1551 aa32.46■■■□□ 2.79
DDR1-279ENST00000515529 GLTPD2A6NH11 291 aa32.46■■■□□ 2.79
DDR1-279ENST00000515529 GNAI2P04899 355 aa32.46■■■□□ 2.79
DDR1-279ENST00000515529 PANK1Q8TE04 598 aa32.46■■■□□ 2.79
DDR1-279ENST00000515529 ZC3H12CQ9C0D7 883 aaKnown RBP32.46■■■□□ 2.79
DDR1-279ENST00000515529 G3V3G9 751 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 RIMBP2O15034 1052 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 PLIN1O60240 522 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 KCNJ4P48050 445 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 CHRNDQ07001 517 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 DCAF8Q5TAQ9 597 aa32.45■■■□□ 2.79
DDR1-279ENST00000515529 FZD9O00144 591 aa32.43■■■□□ 2.78
DDR1-279ENST00000515529 LEMD3Q9Y2U8 911 aa32.43■■■□□ 2.78
DDR1-279ENST00000515529 GPR101Q96P66 508 aaPredicted RBP32.42■■■□□ 2.78
DDR1-279ENST00000515529 ZNRF3Q9ULT6 936 aa32.42■■■□□ 2.78
DDR1-279ENST00000515529 LTBP1Q14766 1721 aa32.42■■■□□ 2.78
DDR1-279ENST00000515529 ZNF541Q9H0D2 1346 aa32.4■■■□□ 2.78
DDR1-279ENST00000515529 HELBQ8NG08 1087 aaPredicted RBP32.39■■■□□ 2.78
DDR1-279ENST00000515529 ZNF804BA4D1E1 1349 aa32.39■■■□□ 2.78
DDR1-279ENST00000515529 COL4A5P29400 1685 aa32.39■■■□□ 2.78
DDR1-279ENST00000515529 DDNO94850 711 aaPredicted RBP32.38■■■□□ 2.77
DDR1-279ENST00000515529 PUS3Q9BZE2 481 aaKnown RBP32.38■■■□□ 2.77
DDR1-279ENST00000515529 MROH5Q6ZUA9 1318 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 TAF5LO75529 589 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 MVPQ14764 893 aaKnown RBP32.37■■■□□ 2.77
DDR1-279ENST00000515529 KLHDC4Q8TBB5 520 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 DBNDD1Q9H9R9 158 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 NMRK2Q9NPI5 230 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 GJA3Q9Y6H8 435 aa32.37■■■□□ 2.77
DDR1-279ENST00000515529 MED23Q9ULK4 1368 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 SRGAP3O43295 1099 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 PDE3AQ14432 1141 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 DOK7Q18PE1 504 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 CHMP4BQ9H444 224 aaKnown RBP32.36■■■□□ 2.77
DDR1-279ENST00000515529 RRAGCQ9HB90 399 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 DDX19BQ9UMR2 479 aa32.36■■■□□ 2.77
DDR1-279ENST00000515529 ZBTB7BO15156 539 aaPredicted RBP32.35■■■□□ 2.77
DDR1-279ENST00000515529 ECE2O60344 883 aa32.35■■■□□ 2.77
DDR1-279ENST00000515529 RFX5P48382 616 aaPredicted RBP32.35■■■□□ 2.77
DDR1-279ENST00000515529 METTL24Q5JXM2 366 aa32.35■■■□□ 2.77
DDR1-279ENST00000515529 GPC2Q8N158 579 aa32.35■■■□□ 2.77
DDR1-279ENST00000515529 COG6Q9Y2V7 657 aa32.35■■■□□ 2.77
DDR1-279ENST00000515529 PTPN12Q05209 780 aaKnown RBP32.34■■■□□ 2.77
DDR1-279ENST00000515529 LRRC24Q50LG9 513 aa32.34■■■□□ 2.77
DDR1-279ENST00000515529 RIPOR2Q9Y4F9 1068 aa32.34■■■□□ 2.77
DDR1-279ENST00000515529 MTX1Q13505 466 aa32.33■■■□□ 2.77
DDR1-279ENST00000515529 TNIP1Q15025 636 aa32.33■■■□□ 2.77
DDR1-279ENST00000515529 CIAPIN1Q6FI81 312 aa32.33■■■□□ 2.77
DDR1-279ENST00000515529 WTIPA6NIX2 430 aaPredicted RBP32.32■■■□□ 2.76
DDR1-279ENST00000515529 EYA2O00167 538 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 RAD17O75943 681 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 VEGFAP15692 232 aaPredicted RBP32.32■■■□□ 2.76
DDR1-279ENST00000515529 CXCL9Q07325 125 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 C16orf71Q8IYS4 520 aaPredicted RBP32.32■■■□□ 2.76
DDR1-279ENST00000515529 SIL1Q9H173 461 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 C1orf115Q9H7X2 142 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 FBXO3Q9UK99 471 aa32.32■■■□□ 2.76
DDR1-279ENST00000515529 IQCA1LA6NCM1 817 aa32.29■■■□□ 2.76
DDR1-279ENST00000515529 YDJCA8MPS7 323 aa32.29■■■□□ 2.76
DDR1-279ENST00000515529 L3MBTL3Q96JM7 780 aaPredicted RBP32.29■■■□□ 2.76
DDR1-279ENST00000515529 LMOD1P29536 600 aaPredicted RBP32.28■■■□□ 2.76
DDR1-279ENST00000515529 RRP1P56182 461 aaKnown RBP32.28■■■□□ 2.76
DDR1-279ENST00000515529 UBE4AQ14139 1066 aa32.28■■■□□ 2.76
DDR1-279ENST00000515529 C20orf194Q5TEA3 1177 aa32.28■■■□□ 2.76
DDR1-279ENST00000515529 COA1Q9GZY4 146 aa32.28■■■□□ 2.76
DDR1-279ENST00000515529 COPRSQ9NQ92 184 aa32.28■■■□□ 2.76
DDR1-279ENST00000515529 PA2G4Q9UQ80 394 aaKnown RBP32.28■■■□□ 2.76
DDR1-279ENST00000515529 WDR90Q96KV7 1748 aa32.28■■■□□ 2.76
DDR1-279ENST00000515529 SNAP23O00161 211 aa32.27■■■□□ 2.76
DDR1-279ENST00000515529 KIF3CO14782 793 aa32.27■■■□□ 2.76
DDR1-279ENST00000515529 CIAO1O76071 339 aa32.27■■■□□ 2.76
DDR1-279ENST00000515529 PODNQ7Z5L7 613 aa32.27■■■□□ 2.76
DDR1-279ENST00000515529 ZNF804AQ7Z570 1209 aa32.26■■■□□ 2.75
DDR1-279ENST00000515529 A0A1B0GUL6 1792 aa32.25■■■□□ 2.75
DDR1-279ENST00000515529 PDE8BO95263 885 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms