RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ZNF408Q9H9D4 720 aa23.81■■□□□ 1.4
SPOP-220ENST00000515508 ZNF609O15014 1411 aa23.81■■□□□ 1.4
SPOP-220ENST00000515508 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
SPOP-220ENST00000515508 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
SPOP-220ENST00000515508 MYD88Q99836 296 aa23.8■■□□□ 1.4
SPOP-220ENST00000515508 SEC31BQ9NQW1 1179 aa23.8■■□□□ 1.4
SPOP-220ENST00000515508 POLR2AP24928 1970 aaKnown RBP23.8■■□□□ 1.4
SPOP-220ENST00000515508 CA12O43570 354 aa23.79■■□□□ 1.4
SPOP-220ENST00000515508 EGFRP00533 1210 aa23.79■■□□□ 1.4
SPOP-220ENST00000515508 DOK7Q18PE1 504 aa23.79■■□□□ 1.4
SPOP-220ENST00000515508 USP48Q86UV5 1035 aa23.79■■□□□ 1.4
SPOP-220ENST00000515508 KCNQ5Q9NR82 932 aa23.79■■□□□ 1.4
SPOP-220ENST00000515508 ELL2O00472 640 aaPredicted RBP23.78■■□□□ 1.4
SPOP-220ENST00000515508 TBC1D10BQ4KMP7 808 aaPredicted RBP23.78■■□□□ 1.4
SPOP-220ENST00000515508 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
SPOP-220ENST00000515508 MYH3P11055 1940 aa23.77■■□□□ 1.4
SPOP-220ENST00000515508 CCDC152Q4G0S7 254 aa23.77■■□□□ 1.4
SPOP-220ENST00000515508 KRT26Q7Z3Y9 468 aa23.77■■□□□ 1.4
SPOP-220ENST00000515508 ZC3H12CQ9C0D7 883 aaKnown RBP23.77■■□□□ 1.4
SPOP-220ENST00000515508 CWC25Q9NXE8 425 aaPredicted RBP23.77■■□□□ 1.4
SPOP-220ENST00000515508 PDE8AO60658 829 aa23.76■■□□□ 1.39
SPOP-220ENST00000515508 UFL1O94874 794 aa23.76■■□□□ 1.39
SPOP-220ENST00000515508 VIL1P09327 827 aaKnown RBP23.76■■□□□ 1.39
SPOP-220ENST00000515508 METTL22Q9BUU2 404 aaPredicted RBP23.76■■□□□ 1.39
SPOP-220ENST00000515508 TSKSQ9UJT2 592 aa23.76■■□□□ 1.39
SPOP-220ENST00000515508 DDX58O95786 925 aaKnown RBP23.75■■□□□ 1.39
SPOP-220ENST00000515508 HUNKP57058 714 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 NOGQ13253 232 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 DLK2Q6UY11 383 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 CHMP4AQ9BY43 222 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 ANKIB1Q9P2G1 1089 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 GGA1Q9UJY5 639 aa23.75■■□□□ 1.39
SPOP-220ENST00000515508 KIF4BQ2VIQ3 1234 aa23.74■■□□□ 1.39
SPOP-220ENST00000515508 CCDC30Q5VVM6 783 aa23.74■■□□□ 1.39
SPOP-220ENST00000515508 DCPSQ96C86 337 aaKnown RBP23.74■■□□□ 1.39
SPOP-220ENST00000515508 XDHP47989 1333 aa23.73■■□□□ 1.39
SPOP-220ENST00000515508 SPEF2Q9C093 1822 aa23.73■■□□□ 1.39
SPOP-220ENST00000515508 ADM5C9JUS6 153 aa23.72■■□□□ 1.39
SPOP-220ENST00000515508 GBA2Q9HCG7 927 aaPredicted RBP23.72■■□□□ 1.39
SPOP-220ENST00000515508 ZNF646O15015 1829 aaPredicted RBP23.72■■□□□ 1.39
SPOP-220ENST00000515508 CASP8AP2Q9UKL3 1982 aa23.71■■□□□ 1.39
SPOP-220ENST00000515508 ZNF280AP59817 542 aaPredicted RBP23.71■■□□□ 1.39
SPOP-220ENST00000515508 RBM26Q5T8P6 1007 aaKnown RBP23.71■■□□□ 1.39
SPOP-220ENST00000515508 TSPYL6Q8N831 410 aa23.71■■□□□ 1.39
SPOP-220ENST00000515508 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
SPOP-220ENST00000515508 ZIC5Q96T25 663 aa23.71■■□□□ 1.39
SPOP-220ENST00000515508 GGA3Q9NZ52 723 aa23.71■■□□□ 1.39
SPOP-220ENST00000515508 MAP3K2Q9Y2U5 619 aa23.71■■□□□ 1.39
SPOP-220ENST00000515508 FAM155AB1AL88 458 aaPredicted RBP23.7■■□□□ 1.38
SPOP-220ENST00000515508 CTSWP56202 376 aa23.7■■□□□ 1.38
SPOP-220ENST00000515508 RGMBQ6NW40 437 aa23.7■■□□□ 1.38
SPOP-220ENST00000515508 RSBN1LQ6PCB5 846 aaPredicted RBP23.7■■□□□ 1.38
SPOP-220ENST00000515508 ANKRD18AQ8IVF6 992 aa23.7■■□□□ 1.38
SPOP-220ENST00000515508 AGBL3Q8NEM8 1001 aa23.7■■□□□ 1.38
SPOP-220ENST00000515508 CCDC85AQ96PX6 553 aaPredicted RBP23.7■■□□□ 1.38
SPOP-220ENST00000515508 G3V3G9 751 aa23.69■■□□□ 1.38
SPOP-220ENST00000515508 IGKV5-2P06315 115 aa23.69■■□□□ 1.38
SPOP-220ENST00000515508 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
SPOP-220ENST00000515508 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
SPOP-220ENST00000515508 C2orf69Q8N8R5 385 aa23.69■■□□□ 1.38
SPOP-220ENST00000515508 SULF1Q8IWU6 871 aa23.68■■□□□ 1.38
SPOP-220ENST00000515508 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
SPOP-220ENST00000515508 ASTN2O75129 1339 aaPredicted RBP23.67■■□□□ 1.38
SPOP-220ENST00000515508 PI4KAP2A4QPH2 592 aa23.67■■□□□ 1.38
SPOP-220ENST00000515508 ATP2B4P23634 1241 aa23.67■■□□□ 1.38
SPOP-220ENST00000515508 PI4KAP1Q8N8J0 262 aa23.67■■□□□ 1.38
SPOP-220ENST00000515508 GMLQ99445 158 aa23.67■■□□□ 1.38
SPOP-220ENST00000515508 MED23Q9ULK4 1368 aa23.66■■□□□ 1.38
SPOP-220ENST00000515508 CCDC27Q2M243 656 aa23.66■■□□□ 1.38
SPOP-220ENST00000515508 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
SPOP-220ENST00000515508 TTLL11Q8NHH1 800 aa23.66■■□□□ 1.38
SPOP-220ENST00000515508 TSR2Q969E8 191 aaKnown RBP23.66■■□□□ 1.38
SPOP-220ENST00000515508 CCDC102AQ96A19 550 aa23.66■■□□□ 1.38
SPOP-220ENST00000515508 PAPPA2Q9BXP8 1791 aa23.65■■□□□ 1.38
SPOP-220ENST00000515508 BSDC1Q9NW68 430 aaPredicted RBP23.65■■□□□ 1.38
SPOP-220ENST00000515508 PITPNM2Q9BZ72 1349 aa23.64■■□□□ 1.38
SPOP-220ENST00000515508 NEXNQ0ZGT2 675 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 ANGEL2Q5VTE6 544 aaKnown RBP23.64■■□□□ 1.37
SPOP-220ENST00000515508 CDCA5Q96FF9 252 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 STK31Q9BXU1 1019 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 MCOLN1Q9GZU1 580 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 GREM2Q9H772 168 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 SAGE1Q9NXZ1 904 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 AKAP11Q9UKA4 1901 aa23.64■■□□□ 1.37
SPOP-220ENST00000515508 USP17L3A6NCW0 530 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 USP17L4A6NCW7 530 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 CCDC85CA6NKD9 419 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 NEURL1BA8MQ27 555 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 SLC10A3P09131 477 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 USP17L8P0C7I0 530 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 ZNF157P51786 506 aaPredicted RBP23.63■■□□□ 1.37
SPOP-220ENST00000515508 SCARF1Q14162 830 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 CWF19L2Q2TBE0 894 aaKnown RBP23.63■■□□□ 1.37
SPOP-220ENST00000515508 FAM161AQ3B820 660 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 USP17L1Q7RTZ2 530 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 MYOZ2Q9NPC6 264 aa23.63■■□□□ 1.37
SPOP-220ENST00000515508 RGS19P49795 217 aa23.62■■□□□ 1.37
SPOP-220ENST00000515508 WWC1Q8IX03 1113 aa23.62■■□□□ 1.37
SPOP-220ENST00000515508 MINPP1Q9UNW1 487 aa23.62■■□□□ 1.37
SPOP-220ENST00000515508 CACNA1FO60840 1977 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms