RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 GDF6Q6KF10 455 aaPredicted RBP9.11□□□□□ -0.95
RUFY3-215ENST00000515479 FNDC3AQ9Y2H6 1198 aaKnown RBP9.11□□□□□ -0.95
RUFY3-215ENST00000515479 ZBTB39O15060 712 aa9.1□□□□□ -0.95
RUFY3-215ENST00000515479 DYRK3O43781 588 aa9.1□□□□□ -0.95
RUFY3-215ENST00000515479 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
RUFY3-215ENST00000515479 DEAF1O75398 565 aaPredicted RBP9.08□□□□□ -0.96
RUFY3-215ENST00000515479 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
RUFY3-215ENST00000515479 IL22RA1Q8N6P7 574 aa9.08□□□□□ -0.96
RUFY3-215ENST00000515479 HYAL2Q12891 473 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 XP32Q5T750 250 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 ATCAYQ86WG3 371 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 Q8N3U1 123 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 TP53INP1Q96A56 240 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 TRIM33Q9UPN9 1127 aa9.07□□□□□ -0.96
RUFY3-215ENST00000515479 SCNN1AP37088 669 aa9.06□□□□□ -0.96
RUFY3-215ENST00000515479 ZMYM1Q5SVZ6 1142 aa9.06□□□□□ -0.96
RUFY3-215ENST00000515479 COL13A1Q5TAT6 717 aaPredicted RBP9.06□□□□□ -0.96
RUFY3-215ENST00000515479 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
RUFY3-215ENST00000515479 HELQQ8TDG4 1101 aa9.06□□□□□ -0.96
RUFY3-215ENST00000515479 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
RUFY3-215ENST00000515479 SPACA7Q96KW9 195 aa9.06□□□□□ -0.96
RUFY3-215ENST00000515479 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
RUFY3-215ENST00000515479 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
RUFY3-215ENST00000515479 WFDC12Q8WWY7 111 aa9.05□□□□□ -0.96
RUFY3-215ENST00000515479 DLL1O00548 723 aa9.04□□□□□ -0.96
RUFY3-215ENST00000515479 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
RUFY3-215ENST00000515479 ATP11AP98196 1134 aa9.04□□□□□ -0.96
RUFY3-215ENST00000515479 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 NOS3P29474 1203 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 PRSS36Q5K4E3 855 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 CEP135Q66GS9 1140 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
RUFY3-215ENST00000515479 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
RUFY3-215ENST00000515479 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 ELP3Q9H9T3 547 aa9.03□□□□□ -0.96
RUFY3-215ENST00000515479 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
RUFY3-215ENST00000515479 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
RUFY3-215ENST00000515479 CYP2E1P05181 493 aaPredicted RBP9.02□□□□□ -0.97
RUFY3-215ENST00000515479 PCSK2P16519 638 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
RUFY3-215ENST00000515479 ZNF438Q7Z4V0 828 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 CACTIN-AS1Q8N1I8 211 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 EDEM1Q92611 657 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 LACRTQ9GZZ8 138 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
RUFY3-215ENST00000515479 KIF4AO95239 1232 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
RUFY3-215ENST00000515479 MPSTP25325 297 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 SETDB1Q15047 1291 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 NOM1Q5C9Z4 860 aaKnown RBP9.01□□□□□ -0.97
RUFY3-215ENST00000515479 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 MAP4K3Q8IVH8 894 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 GTF3C2Q8WUA4 911 aaPredicted RBP9.01□□□□□ -0.97
RUFY3-215ENST00000515479 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
RUFY3-215ENST00000515479 RASSF4Q9H2L5 321 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 PPME1Q9Y570 386 aa9.01□□□□□ -0.97
RUFY3-215ENST00000515479 SCO2A0A1W2PP80 73 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 SSFA2P28290 1259 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 TTC16Q8NEE8 873 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 MUC3BQ9H195 1237 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 KANSL3Q9P2N6 904 aa9□□□□□ -0.97
RUFY3-215ENST00000515479 LINC01387J3KSC0 135 aa8.99□□□□□ -0.97
RUFY3-215ENST00000515479 EIF1AXP47813 144 aaKnown RBP8.99□□□□□ -0.97
RUFY3-215ENST00000515479 MTMR3Q13615 1198 aa8.99□□□□□ -0.97
RUFY3-215ENST00000515479 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
RUFY3-215ENST00000515479 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
RUFY3-215ENST00000515479 AKTIPQ9H8T0 292 aa8.99□□□□□ -0.97
RUFY3-215ENST00000515479 ALX3O95076 343 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 PDGFAP04085 211 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 CDC27P30260 824 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 CDC25BP30305 580 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 C8orf34Q49A92 452 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 TXNDC11Q6PKC3 985 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 PBX4Q9BYU1 374 aa8.98□□□□□ -0.97
RUFY3-215ENST00000515479 A6NHS1 94 aa8.97□□□□□ -0.97
RUFY3-215ENST00000515479 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
RUFY3-215ENST00000515479 MZF1P28698 734 aaPredicted RBP8.97□□□□□ -0.97
RUFY3-215ENST00000515479 CEP120Q8N960 986 aa8.97□□□□□ -0.97
RUFY3-215ENST00000515479 CNTN3Q9P232 1028 aa8.97□□□□□ -0.97
RUFY3-215ENST00000515479 CARNS1A5YM72 827 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 FAM177BA6PVY3 158 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 CES1P23141 567 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 AAMPQ13685 434 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 ALKBH2Q6NS38 261 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 C1orf127Q8N9H9 656 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 GGNBP2Q9H3C7 697 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 MTMR7Q9Y216 660 aa8.96□□□□□ -0.98
RUFY3-215ENST00000515479 PTPRAP18433 802 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 XKR5Q6UX68 686 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 ADAMTSL4Q6UY14 1074 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 AGGF1Q8N302 714 aaeCLIP8.95□□□□□ -0.98
RUFY3-215ENST00000515479 TMEM130Q8N3G9 435 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 CARD10Q9BWT7 1032 aa8.95□□□□□ -0.98
RUFY3-215ENST00000515479 GLB1P16278 677 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms