RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 EVI5LQ96CN4 794 aa11.14□□□□□ -0.63
CPNE4-213ENST00000515418 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
CPNE4-213ENST00000515418 SPEF2Q9C093 1822 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 PDE8BO95263 885 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 CHGBP05060 677 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 TM4SF1P30408 202 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
CPNE4-213ENST00000515418 EZH2Q15910 746 aaKnown RBP11.13□□□□□ -0.63
CPNE4-213ENST00000515418 ATP2B3Q16720 1220 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 GORABQ5T7V8 394 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
CPNE4-213ENST00000515418 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
CPNE4-213ENST00000515418 ZNF609O15014 1411 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 RIC1Q4ADV7 1423 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
CPNE4-213ENST00000515418 CELF1Q92879 486 aaKnown RBP11.12□□□□□ -0.63
CPNE4-213ENST00000515418 KIF2CQ99661 725 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 CASZ1Q86V15 1759 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
CPNE4-213ENST00000515418 FAM227BQ96M60 508 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 HAUS7Q99871 368 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 ANO2Q9NQ90 1003 aa11.12□□□□□ -0.63
CPNE4-213ENST00000515418 LAMB2P55268 1798 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 CARMIL3Q8ND23 1372 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 GOLIM4O00461 696 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 REC8O95072 547 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 SERPINB2P05120 415 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 IFIT1P09914 478 aaKnown RBP11.11□□□□□ -0.63
CPNE4-213ENST00000515418 DDR1Q08345 913 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 SCARF1Q14162 830 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 PRR5LQ6MZQ0 368 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 CNBD1Q8NA66 436 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 CAMKK2Q96RR4 588 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 DIAPH3Q9NSV4 1193 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 MROH5Q6ZUA9 1318 aa11.11□□□□□ -0.63
CPNE4-213ENST00000515418 RTL9Q8NET4 1388 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPNE4-213ENST00000515418 CHRNDQ07001 517 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 SLC51AQ86UW1 340 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
CPNE4-213ENST00000515418 COL24A1Q17RW2 1714 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 TNS1Q9HBL0 1735 aaKnown RBP11.1□□□□□ -0.63
CPNE4-213ENST00000515418 SGSM2O43147 1006 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 FGFR2P21802 821 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 RPS8P62241 208 aaKnown RBP11.1□□□□□ -0.63
CPNE4-213ENST00000515418 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-213ENST00000515418 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
CPNE4-213ENST00000515418 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
CPNE4-213ENST00000515418 PHKA1P46020 1223 aa11.09□□□□□ -0.63
CPNE4-213ENST00000515418 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
CPNE4-213ENST00000515418 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
CPNE4-213ENST00000515418 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-213ENST00000515418 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-213ENST00000515418 A0A0D9SFI3 127 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 CCDC102BQ68D86 513 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 LPIN2Q92539 896 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 MINPP1Q9UNW1 487 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 PNPLA7Q6ZV29 1317 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 MCAMP43121 646 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 ZAP70P43403 619 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 BCAMP50895 628 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 PTH1RQ03431 593 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 SEC62Q99442 399 aaKnown RBP11.08□□□□□ -0.64
CPNE4-213ENST00000515418 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
CPNE4-213ENST00000515418 PALD1Q9ULE6 856 aa11.08□□□□□ -0.64
CPNE4-213ENST00000515418 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 RUFY2Q8WXA3 655 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 CD2BP2O95400 341 aaKnown RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 SLC5A1P13866 664 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 SLC15A2Q16348 729 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 KBTBD3Q8NAB2 608 aa11.07□□□□□ -0.64
CPNE4-213ENST00000515418 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
CPNE4-213ENST00000515418 ST5P78524 1137 aa11.06□□□□□ -0.64
CPNE4-213ENST00000515418 CCDC129Q6ZRS4 1044 aa11.06□□□□□ -0.64
CPNE4-213ENST00000515418 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
CPNE4-213ENST00000515418 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-213ENST00000515418 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
CPNE4-213ENST00000515418 IQSEC3Q9UPP2 1182 aaPredicted RBP11.06□□□□□ -0.64
CPNE4-213ENST00000515418 LRP5O75197 1615 aa11.06□□□□□ -0.64
CPNE4-213ENST00000515418 MYO5AQ9Y4I1 1855 aaKnown RBP11.05□□□□□ -0.64
CPNE4-213ENST00000515418 HIP1O00291 1037 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 CYP2E1P05181 493 aaPredicted RBP11.05□□□□□ -0.64
CPNE4-213ENST00000515418 MMP10P09238 476 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 GYG1P46976 350 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms