RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CDC5LQ99459 802 aaKnown RBP14.58□□□□□ -0.08
VCAN-212ENST00000515397 PLA2G12BQ9BX93 195 aa14.58□□□□□ -0.08
VCAN-212ENST00000515397 VPS33BQ9H267 617 aa14.58□□□□□ -0.08
VCAN-212ENST00000515397 SMC4Q9NTJ3 1288 aa14.58□□□□□ -0.08
VCAN-212ENST00000515397 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
VCAN-212ENST00000515397 MINPP1Q9UNW1 487 aa14.58□□□□□ -0.08
VCAN-212ENST00000515397 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
VCAN-212ENST00000515397 SNAP23O00161 211 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 GRM8O00222 908 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 GMPSP49915 693 aaPredicted RBP14.57□□□□□ -0.08
VCAN-212ENST00000515397 APLP1P51693 650 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 CIAPIN1Q6FI81 312 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 LMBR1LQ6UX01 489 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 SUCLG2Q96I99 432 aa14.57□□□□□ -0.08
VCAN-212ENST00000515397 ZNF594Q96JF6 807 aaPredicted RBP14.57□□□□□ -0.08
VCAN-212ENST00000515397 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
VCAN-212ENST00000515397 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
VCAN-212ENST00000515397 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 G3V3G9 751 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 PSMD14O00487 310 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 ECE2O60344 883 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 NBPF7P0C2Y1 421 aaPredicted RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 LMOD1P29536 600 aaPredicted RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 IGHMBP2P38935 993 aaKnown RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 MAP1SQ66K74 1059 aaPredicted RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 HELBQ8NG08 1087 aaPredicted RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 EYA3Q99504 573 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
VCAN-212ENST00000515397 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
VCAN-212ENST00000515397 ALDH1L1O75891 902 aa14.55□□□□□ -0.08
VCAN-212ENST00000515397 FMR1Q06787 632 aaKnown RBP eCLIP14.55□□□□□ -0.08
VCAN-212ENST00000515397 KAZALD1Q96I82 304 aa14.55□□□□□ -0.08
VCAN-212ENST00000515397 MPHOSPH8Q99549 860 aa14.55□□□□□ -0.08
VCAN-212ENST00000515397 ANKRD18BA2A2Z9 1011 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 TAF5LO75529 589 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 KLRK1P26718 216 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 TNIP1Q15025 636 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 TXNRD3Q86VQ6 643 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 DNAJC5GQ8N7S2 189 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 XDHP47989 1333 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 CACNA1FO60840 1977 aa14.54□□□□□ -0.08
VCAN-212ENST00000515397 PLIN1O60240 522 aa14.53□□□□□ -0.08
VCAN-212ENST00000515397 ATP2B4P23634 1241 aa14.53□□□□□ -0.08
VCAN-212ENST00000515397 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
VCAN-212ENST00000515397 RARSP54136 660 aaKnown RBP14.53□□□□□ -0.08
VCAN-212ENST00000515397 IFIT5Q13325 482 aaKnown RBP14.53□□□□□ -0.08
VCAN-212ENST00000515397 CNOT7Q9UIV1 285 aaKnown RBP14.53□□□□□ -0.08
VCAN-212ENST00000515397 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
VCAN-212ENST00000515397 PTPRCP08575 1304 aa14.52□□□□□ -0.08
VCAN-212ENST00000515397 ITGBL1O95965 494 aaPredicted RBP14.52□□□□□ -0.09
VCAN-212ENST00000515397 HIRAP54198 1017 aaPredicted RBP14.52□□□□□ -0.09
VCAN-212ENST00000515397 CHRNDQ07001 517 aa14.52□□□□□ -0.09
VCAN-212ENST00000515397 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
VCAN-212ENST00000515397 PNMA8AQ86V59 439 aaPredicted RBP14.52□□□□□ -0.09
VCAN-212ENST00000515397 CNTROBQ8N137 903 aa14.52□□□□□ -0.09
VCAN-212ENST00000515397 TRPM4Q8TD43 1214 aa14.52□□□□□ -0.09
VCAN-212ENST00000515397 BICC1Q9H694 974 aaKnown RBP14.52□□□□□ -0.09
VCAN-212ENST00000515397 LRRC37AA6NMS7 1700 aa14.52□□□□□ -0.09
VCAN-212ENST00000515397 LTBP1Q14766 1721 aa14.52□□□□□ -0.09
VCAN-212ENST00000515397 BCAR3O75815 825 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 CCDC57Q2TAC2 916 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 TAF7LQ5H9L4 462 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 MXD3Q9BW11 206 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
VCAN-212ENST00000515397 USP44Q9H0E7 712 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
VCAN-212ENST00000515397 TRAF5O00463 557 aa14.5□□□□□ -0.09
VCAN-212ENST00000515397 EGFRP00533 1210 aa14.5□□□□□ -0.09
VCAN-212ENST00000515397 TBC1D10BQ4KMP7 808 aaPredicted RBP14.5□□□□□ -0.09
VCAN-212ENST00000515397 DLK2Q6UY11 383 aa14.5□□□□□ -0.09
VCAN-212ENST00000515397 FBXW7Q969H0 707 aa14.5□□□□□ -0.09
VCAN-212ENST00000515397 ADARB2Q9NS39 739 aaKnown RBP14.5□□□□□ -0.09
VCAN-212ENST00000515397 ZNF804BA4D1E1 1349 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 KCNJ4P48050 445 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 LDHAL6AQ6ZMR3 332 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 USP50Q70EL3 339 aaPredicted RBP14.49□□□□□ -0.09
VCAN-212ENST00000515397 ANKRD44Q8N8A2 993 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 KLHDC4Q8TBB5 520 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 FRAT1Q92837 279 aaPredicted RBP14.49□□□□□ -0.09
VCAN-212ENST00000515397 ANKRD2Q9GZV1 360 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 CNNM1Q9NRU3 951 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 SCN4AP35499 1836 aa14.49□□□□□ -0.09
VCAN-212ENST00000515397 SPEF2Q9C093 1822 aa14.48□□□□□ -0.09
VCAN-212ENST00000515397 UTYO14607 1347 aa14.48□□□□□ -0.09
VCAN-212ENST00000515397 H7C1D1 291 aa14.48□□□□□ -0.09
VCAN-212ENST00000515397 VIL1P09327 827 aaKnown RBP14.48□□□□□ -0.09
VCAN-212ENST00000515397 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
VCAN-212ENST00000515397 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
VCAN-212ENST00000515397 LEMD3Q9Y2U8 911 aa14.48□□□□□ -0.09
VCAN-212ENST00000515397 MYH3P11055 1940 aa14.48□□□□□ -0.09
VCAN-212ENST00000515397 PASKQ96RG2 1323 aa14.47□□□□□ -0.09
VCAN-212ENST00000515397 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
VCAN-212ENST00000515397 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
VCAN-212ENST00000515397 ASTN2O75129 1339 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms