RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
CPNE4-211ENST00000514439 GDPD2Q9HCC8 539 aa9.79□□□□□ -0.84
CPNE4-211ENST00000514439 TMEM63CQ9P1W3 806 aa9.79□□□□□ -0.84
CPNE4-211ENST00000514439 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
CPNE4-211ENST00000514439 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-211ENST00000514439 CDHR2Q9BYE9 1310 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 IFIT1P09914 478 aaKnown RBP9.78□□□□□ -0.84
CPNE4-211ENST00000514439 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
CPNE4-211ENST00000514439 TOB2Q14106 344 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-211ENST00000514439 KRT32Q14532 448 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 ANKRD1Q15327 319 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 SLFNL1Q499Z3 407 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 ALDH8A1Q9H2A2 487 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-211ENST00000514439 F13A1P00488 732 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 IFIT5Q13325 482 aaKnown RBP9.78□□□□□ -0.84
CPNE4-211ENST00000514439 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 FAM43AQ8N2R8 423 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 WNK3Q9BYP7 1800 aa9.78□□□□□ -0.84
CPNE4-211ENST00000514439 CYP21A2P08686 494 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 ADORA1P30542 326 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 ZMYM1Q5SVZ6 1142 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 USP48Q86UV5 1035 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.77□□□□□ -0.85
CPNE4-211ENST00000514439 HELLSQ9NRZ9 838 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 AKAP2Q9Y2D5 859 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 ADAMTS2O95450 1211 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-211ENST00000514439 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 MTMR6Q9Y217 621 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 CNPY2Q9Y2B0 182 aa9.77□□□□□ -0.85
CPNE4-211ENST00000514439 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 ITGA6P23229 1130 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 CTSWP56202 376 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 CCDC158Q5M9N0 1113 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 TTC39AQ5SRH9 613 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 GORABQ5T7V8 394 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 TTLL11Q8NHH1 800 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 DSCC1Q9BVC3 393 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 GREM2Q9H772 168 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 DOT1LQ8TEK3 1739 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 SPEF2Q9C093 1822 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 MAST3O60307 1309 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 SYCE3A1L190 88 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 IRS4O14654 1257 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 RNF113AO15541 343 aaKnown RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 IL6STP40189 918 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 DZIP3Q86Y13 1208 aaKnown RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 TRMT112Q9UI30 125 aaKnown RBP9.76□□□□□ -0.85
CPNE4-211ENST00000514439 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 ATP6V1DQ9Y5K8 247 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
CPNE4-211ENST00000514439 UBN2Q6ZU65 1347 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-211ENST00000514439 ERVV-1B6SEH8 477 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPNE4-211ENST00000514439 DDB1Q16531 1140 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 STOX1Q6ZVD7 989 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 RIPOR2Q9Y4F9 1068 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 ANKRD36CQ5JPF3 1778 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
CPNE4-211ENST00000514439 A0A0G2JS52 829 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 HSPD1P10809 573 aaKnown RBP9.74□□□□□ -0.85
CPNE4-211ENST00000514439 STK3Q13188 491 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 SCARF1Q14162 830 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 ATP2B3Q16720 1220 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 METTL24Q5JXM2 366 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 LDHAL6AQ6ZMR3 332 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 RBSNQ9H1K0 784 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 THRAP3Q9Y2W1 955 aaKnown RBP9.74□□□□□ -0.85
CPNE4-211ENST00000514439 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 M0R2C6 588 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 FIBPO43427 364 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 LARP1BQ659C4 914 aaKnown RBP9.74□□□□□ -0.85
CPNE4-211ENST00000514439 Q6ZUG5 572 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 OSBP2Q969R2 916 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 SYAP1Q96A49 352 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-211ENST00000514439 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
CPNE4-211ENST00000514439 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-211ENST00000514439 PDE8AO60658 829 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 ZAP70P43403 619 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 DNM1Q05193 864 aaKnown RBP9.73□□□□□ -0.85
CPNE4-211ENST00000514439 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 ZNF34Q8IZ26 560 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 GTF3C6Q969F1 213 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 ABCC12Q96J65 1359 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 SLIT2O94813 1529 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 PDCP20941 246 aa9.73□□□□□ -0.85
CPNE4-211ENST00000514439 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
CPNE4-211ENST00000514439 CCDC173Q0VFZ6 552 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms