RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GNAI3P08754 354 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 UBTFL1P0CB47 393 aaPredicted RBP10.41□□□□□ -0.74
CCL28-204ENST00000514421 ATP2B4P23634 1241 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 FAM161AQ3B820 660 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 RABL6Q3YEC7 729 aaPredicted RBP10.41□□□□□ -0.74
CCL28-204ENST00000514421 SLC51AQ86UW1 340 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 DZIP1LQ8IYY4 767 aaKnown RBP10.41□□□□□ -0.74
CCL28-204ENST00000514421 LARGE2Q8N3Y3 721 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
CCL28-204ENST00000514421 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 POLLQ9UGP5 575 aa10.41□□□□□ -0.74
CCL28-204ENST00000514421 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 GLTPD2A6NH11 291 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 TAF7LQ5H9L4 462 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 C20orf194Q5TEA3 1177 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 LDHAL6AQ6ZMR3 332 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
CCL28-204ENST00000514421 TMEM57Q8N5G2 664 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 CRBNQ96SW2 442 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 EYA3Q99504 573 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 ZC3H12CQ9C0D7 883 aaKnown RBP10.4□□□□□ -0.74
CCL28-204ENST00000514421 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
CCL28-204ENST00000514421 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 CHD4Q14839 1912 aa10.4□□□□□ -0.74
CCL28-204ENST00000514421 TNRC6CQ9HCJ0 1690 aaKnown RBP10.4□□□□□ -0.74
CCL28-204ENST00000514421 KDM2BQ8NHM5 1336 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 COL11A2P13942 1736 aaPredicted RBP10.39□□□□□ -0.75
CCL28-204ENST00000514421 FZD9O00144 591 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 EIF6P56537 245 aaKnown RBP10.39□□□□□ -0.75
CCL28-204ENST00000514421 NIM1KQ8IY84 436 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
CCL28-204ENST00000514421 ZNF594Q96JF6 807 aaPredicted RBP10.39□□□□□ -0.75
CCL28-204ENST00000514421 LEMD3Q9Y2U8 911 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 SNED1Q8TER0 1413 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
CCL28-204ENST00000514421 XDHP47989 1333 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 AOC3Q16853 763 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 MEIS3Q99687 375 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 CNNM1Q9NRU3 951 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 ZNRF3Q9ULT6 936 aa10.38□□□□□ -0.75
CCL28-204ENST00000514421 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
CCL28-204ENST00000514421 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
CCL28-204ENST00000514421 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
CCL28-204ENST00000514421 UFL1O94874 794 aa10.37□□□□□ -0.75
CCL28-204ENST00000514421 GNAI2P04899 355 aa10.37□□□□□ -0.75
CCL28-204ENST00000514421 RLBP1P12271 317 aa10.37□□□□□ -0.75
CCL28-204ENST00000514421 CHRNDQ07001 517 aa10.37□□□□□ -0.75
CCL28-204ENST00000514421 RRAGCQ9HB90 399 aa10.37□□□□□ -0.75
CCL28-204ENST00000514421 G3V3G9 751 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 VEGFAP15692 232 aaPredicted RBP10.36□□□□□ -0.75
CCL28-204ENST00000514421 KCNJ4P48050 445 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 RFX5P48382 616 aaPredicted RBP10.36□□□□□ -0.75
CCL28-204ENST00000514421 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
CCL28-204ENST00000514421 PANK1Q8TE04 598 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
CCL28-204ENST00000514421 RIPOR2Q9Y4F9 1068 aa10.36□□□□□ -0.75
CCL28-204ENST00000514421 DDX60Q8IY21 1712 aaKnown RBP10.36□□□□□ -0.75
CCL28-204ENST00000514421 ZNF804BA4D1E1 1349 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 WTIPA6NIX2 430 aaPredicted RBP10.35□□□□□ -0.75
CCL28-204ENST00000514421 EYA2O00167 538 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 TAF5LO75529 589 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
CCL28-204ENST00000514421 CXCL9Q07325 125 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 TNIP1Q15025 636 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
CCL28-204ENST00000514421 PODNQ7Z5L7 613 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 GPC2Q8N158 579 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 GPR101Q96P66 508 aaPredicted RBP10.35□□□□□ -0.75
CCL28-204ENST00000514421 NMRK2Q9NPI5 230 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
CCL28-204ENST00000514421 MROH5Q6ZUA9 1318 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 FER1L6Q2WGJ9 1857 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 POTECB2RU33 542 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 KIF3CO14782 793 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 ATP8B2P98198 1209 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 MTX1Q13505 466 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 UBE4AQ14139 1066 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 C15orf52Q6ZUT6 534 aaKnown RBP10.34□□□□□ -0.75
CCL28-204ENST00000514421 KLHDC4Q8TBB5 520 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
CCL28-204ENST00000514421 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
CCL28-204ENST00000514421 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 COPRSQ9NQ92 184 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 GJA3Q9Y6H8 435 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 SBF1O95248 1867 aa10.34□□□□□ -0.75
CCL28-204ENST00000514421 ZNF541Q9H0D2 1346 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms