RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 COL4A1P02462 1669 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 CACNA1FO60840 1977 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 G3V3G9 751 aa16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 EPS15P42566 896 aa16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 GMPSP49915 693 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
PDLIM3-210ENST00000514308 YDJCA8MPS7 323 aa16.73■□□□□ 0.27
PDLIM3-210ENST00000514308 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
PDLIM3-210ENST00000514308 KLRG1Q96E93 195 aa16.73■□□□□ 0.27
PDLIM3-210ENST00000514308 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
PDLIM3-210ENST00000514308 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-210ENST00000514308 GRM8O00222 908 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 ECE2O60344 883 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 CSF1RP07333 972 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 ITGA6P23229 1130 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 DOK7Q18PE1 504 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 FAM161AQ3B820 660 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-210ENST00000514308 PTPRCP08575 1304 aa16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 ITGBL1O95965 494 aaPredicted RBP16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 MRPL50Q8N5N7 158 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.27
PDLIM3-210ENST00000514308 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
PDLIM3-210ENST00000514308 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
PDLIM3-210ENST00000514308 H7C1D1 291 aa16.7■□□□□ 0.26
PDLIM3-210ENST00000514308 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
PDLIM3-210ENST00000514308 LTBP1Q14766 1721 aa16.7■□□□□ 0.26
PDLIM3-210ENST00000514308 PSMD14O00487 310 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 NEFLP07196 543 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 FOXO4P98177 505 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 IFIT5Q13325 482 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 ALDH1L2Q3SY69 923 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 DPF2Q92785 391 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-210ENST00000514308 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
PDLIM3-210ENST00000514308 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
PDLIM3-210ENST00000514308 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-210ENST00000514308 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 ADAMTSL1Q8N6G6 1762 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 TMEM88BA6NKF7 163 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
PDLIM3-210ENST00000514308 MYH3P11055 1940 aa16.66■□□□□ 0.26
PDLIM3-210ENST00000514308 KCNJ4P48050 445 aa16.66■□□□□ 0.26
PDLIM3-210ENST00000514308 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
PDLIM3-210ENST00000514308 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
PDLIM3-210ENST00000514308 ZC3H15Q8WU90 426 aaKnown RBP16.66■□□□□ 0.26
PDLIM3-210ENST00000514308 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
PDLIM3-210ENST00000514308 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
PDLIM3-210ENST00000514308 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 CHRNDQ07001 517 aa16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 EPHA10Q5JZY3 1008 aa16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 TRPM4Q8TD43 1214 aa16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 UTYO14607 1347 aa16.64■□□□□ 0.25
PDLIM3-210ENST00000514308 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 ERICH6BQ5W0A0 696 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 RSBN1LQ6PCB5 846 aaPredicted RBP16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 LDHAL6AQ6ZMR3 332 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 PGAP2Q9UHJ9 254 aa16.63■□□□□ 0.25
PDLIM3-210ENST00000514308 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-210ENST00000514308 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
PDLIM3-210ENST00000514308 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
PDLIM3-210ENST00000514308 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
PDLIM3-210ENST00000514308 TRAF5O00463 557 aa16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 TBC1D10BQ4KMP7 808 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 CDC37L1Q7L3B6 337 aa16.61■□□□□ 0.25
PDLIM3-210ENST00000514308 ZNF594Q96JF6 807 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms