RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	GPR101	Q96P66	508 aa	Predicted RBP	21.53	■■□□□ 1.04
MATR3-222	ENST00000513678	CCDC85A	Q96PX6	553 aa	Predicted RBP	21.53	■■□□□ 1.04
MATR3-222	ENST00000513678	SCN9A	Q15858	1988 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	SHTN1	A0MZ66	631 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	TRAF5	O00463	557 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	UFL1	O94874	794 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	TTLL11	Q8NHH1	800 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	MYH16	Q9H6N6	1097 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	CNOT7	Q9UIV1	285 aa	Known RBP	21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	SALL2	Q9Y467	1007 aa	Predicted RBP	21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	MYH3	P11055	1940 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	CACNA1F	O60840	1977 aa		21.52	■■□□□ 1.04
MATR3-222	ENST00000513678	ZNF521	Q96K83	1311 aa		21.52	■■□□□ 1.03
MATR3-222	ENST00000513678	TRPM7	Q96QT4	1865 aa		21.52	■■□□□ 1.03
MATR3-222	ENST00000513678	THSD7B	Q9C0I4	1608 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678		H7C1W4	665 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	CST9	Q5W186	159 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	ANKRD18A	Q8IVF6	992 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	MICALL2	Q8IY33	904 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	SPINK5	Q9NQ38	1064 aa	Predicted RBP	21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	ANKIB1	Q9P2G1	1089 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	GGA1	Q9UJY5	639 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	ZBTB12	Q9Y330	459 aa	Predicted RBP	21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	ZNF609	O15014	1411 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	XDH	P47989	1333 aa		21.51	■■□□□ 1.03
MATR3-222	ENST00000513678	RPS12	P25398	132 aa	Known RBP	21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	EXOSC9	Q06265	439 aa	Known RBP	21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	DOK7	Q18PE1	504 aa		21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	DEFB115	Q30KQ5	88 aa		21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	CDC5L	Q99459	802 aa	Known RBP	21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	ZC3H12C	Q9C0D7	883 aa	Known RBP	21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	KCNQ5	Q9NR82	932 aa		21.5	■■□□□ 1.03
MATR3-222	ENST00000513678	CASP7	P55210	303 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	GCKR	Q14397	625 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	UBE3B	Q7Z3V4	1068 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	DNAAF4	Q8WXU2	420 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	PLA2G12B	Q9BX93	195 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	GLIS2	Q9BZE0	524 aa	Predicted RBP	21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	GREM2	Q9H772	168 aa		21.49	■■□□□ 1.03
MATR3-222	ENST00000513678	ABT1	Q9ULW3	272 aa	Known RBP	21.49	■■□□□ 1.03
MATR3-222	ENST00000513678		H7C1D1	291 aa		21.48	■■□□□ 1.03
MATR3-222	ENST00000513678	FKBP5	Q13451	457 aa	Predicted RBP	21.48	■■□□□ 1.03
MATR3-222	ENST00000513678	BSDC1	Q9NW68	430 aa	Predicted RBP	21.48	■■□□□ 1.03
MATR3-222	ENST00000513678	TLL2	Q9Y6L7	1015 aa		21.48	■■□□□ 1.03
MATR3-222	ENST00000513678	VIL1	P09327	827 aa	Known RBP	21.47	■■□□□ 1.03
MATR3-222	ENST00000513678	LINS1	Q8NG48	757 aa		21.47	■■□□□ 1.03
MATR3-222	ENST00000513678	WDR33	Q9C0J8	1336 aa	Known RBP	21.47	■■□□□ 1.03
MATR3-222	ENST00000513678	PSME4	Q14997	1843 aa		21.46	■■□□□ 1.03
MATR3-222	ENST00000513678	FOXN1	O15353	648 aa		21.46	■■□□□ 1.03
MATR3-222	ENST00000513678	SAMD7	Q7Z3H4	446 aa		21.46	■■□□□ 1.03
MATR3-222	ENST00000513678	WBP1L	Q9NX94	342 aa		21.46	■■□□□ 1.03
MATR3-222	ENST00000513678	EGFR	P00533	1210 aa		21.45	■■□□□ 1.02
MATR3-222	ENST00000513678	ATP2B4	P23634	1241 aa		21.45	■■□□□ 1.02
MATR3-222	ENST00000513678	CDC37L1	Q7L3B6	337 aa		21.45	■■□□□ 1.02
MATR3-222	ENST00000513678	MINPP1	Q9UNW1	487 aa		21.45	■■□□□ 1.02
MATR3-222	ENST00000513678	MED23	Q9ULK4	1368 aa		21.45	■■□□□ 1.02
MATR3-222	ENST00000513678	SPEF2	Q9C093	1822 aa		21.44	■■□□□ 1.02
MATR3-222	ENST00000513678	TNS4	Q8IZW8	715 aa		21.44	■■□□□ 1.02
MATR3-222	ENST00000513678	CELF2	O95319	508 aa	Known RBP	21.43	■■□□□ 1.02
MATR3-222	ENST00000513678	CSF1R	P07333	972 aa		21.43	■■□□□ 1.02
MATR3-222	ENST00000513678	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	21.43	■■□□□ 1.02
MATR3-222	ENST00000513678	SAPCD2	Q86UD0	394 aa		21.43	■■□□□ 1.02
MATR3-222	ENST00000513678	CAPNS2	Q96L46	248 aa		21.43	■■□□□ 1.02
MATR3-222	ENST00000513678	WTIP	A6NIX2	430 aa	Predicted RBP	21.42	■■□□□ 1.02
MATR3-222	ENST00000513678	FAM161A	Q3B820	660 aa		21.42	■■□□□ 1.02
MATR3-222	ENST00000513678	PODN	Q7Z5L7	613 aa		21.42	■■□□□ 1.02
MATR3-222	ENST00000513678	HHIPL1	Q96JK4	782 aa		21.42	■■□□□ 1.02
MATR3-222	ENST00000513678	CCER2	I3L3R5	266 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	ITGA6	P23229	1130 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	ECE1	P42892	770 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	ZNF280A	P59817	542 aa	Predicted RBP	21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	BEND3	Q5T5X7	828 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	CYP4F22	Q6NT55	531 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	RSBN1L	Q6PCB5	846 aa	Predicted RBP	21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	AGBL3	Q8NEM8	1001 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	AIDA	Q96BJ3	306 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	GML	Q99445	158 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678	PRDM10	Q9NQV6	1147 aa		21.41	■■□□□ 1.02
MATR3-222	ENST00000513678		F6X3S4	739 aa		21.4	■■□□□ 1.02
MATR3-222	ENST00000513678		G3V3G9	751 aa		21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	IGHMBP2	P38935	993 aa	Known RBP	21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	CTCF	P49711	727 aa	Predicted RBP	21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	CCT4	P50991	539 aa	Known RBP	21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	KIF4B	Q2VIQ3	1234 aa		21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	DCAF8	Q5TAQ9	597 aa		21.4	■■□□□ 1.02
MATR3-222	ENST00000513678	ZNF646	O15015	1829 aa	Predicted RBP	21.4	■■□□□ 1.02
MATR3-222	ENST00000513678		E9PSI1	815 aa		21.39	■■□□□ 1.01
MATR3-222	ENST00000513678	MAP2K1	Q02750	393 aa	Predicted RBP	21.39	■■□□□ 1.01
MATR3-222	ENST00000513678	USP48	Q86UV5	1035 aa		21.39	■■□□□ 1.01
MATR3-222	ENST00000513678	KRT26	Q7Z3Y9	468 aa		21.38	■■□□□ 1.01
MATR3-222	ENST00000513678	LEMD3	Q9Y2U8	911 aa		21.38	■■□□□ 1.01
MATR3-222	ENST00000513678	USP17L3	A6NCW0	530 aa		21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	USP17L4	A6NCW7	530 aa		21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	FOXO4	P98177	505 aa		21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	RBM26	Q5T8P6	1007 aa	Known RBP	21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	DLK2	Q6UY11	383 aa		21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	USP17L1	Q7RTZ2	530 aa		21.37	■■□□□ 1.01
MATR3-222	ENST00000513678	TXNRD3	Q86VQ6	643 aa		21.36	■■□□□ 1.01
MATR3-222	ENST00000513678	DCPS	Q96C86	337 aa	Known RBP	21.36	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms