RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
PROM1-215ENST00000513448 FBXL16Q8N461 479 aa11.06□□□□□ -0.64
PROM1-215ENST00000513448 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
PROM1-215ENST00000513448 GTF3C6Q969F1 213 aa11.06□□□□□ -0.64
PROM1-215ENST00000513448 EDC3Q96F86 508 aaKnown RBP11.06□□□□□ -0.64
PROM1-215ENST00000513448 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
PROM1-215ENST00000513448 NOL7Q9UMY1 257 aaKnown RBP11.06□□□□□ -0.64
PROM1-215ENST00000513448 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 CYP21A2P08686 494 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 IFIT1P09914 478 aaKnown RBP11.05□□□□□ -0.64
PROM1-215ENST00000513448 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
PROM1-215ENST00000513448 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
PROM1-215ENST00000513448 VPS37CA5D8V6 355 aaPredicted RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 GOLIM4O00461 696 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 TIMM10P62072 90 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 DNM1Q05193 864 aaKnown RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 DHX32Q7L7V1 743 aaKnown RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 AGXT2Q9BYV1 514 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 LRP6O75581 1613 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 ZNF335Q9H4Z2 1342 aaPredicted RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 FIBPO43427 364 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
PROM1-215ENST00000513448 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
PROM1-215ENST00000513448 TOGARAM1Q9Y4F4 1720 aa11.03□□□□□ -0.64
PROM1-215ENST00000513448 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
PROM1-215ENST00000513448 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
PROM1-215ENST00000513448 IFIT5Q13325 482 aaKnown RBP11.03□□□□□ -0.64
PROM1-215ENST00000513448 LRRC24Q50LG9 513 aa11.03□□□□□ -0.64
PROM1-215ENST00000513448 PIGBQ92521 554 aa11.03□□□□□ -0.64
PROM1-215ENST00000513448 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
PROM1-215ENST00000513448 DISP2A7MBM2 1401 aa11.02□□□□□ -0.64
PROM1-215ENST00000513448 PFKFB2O60825 505 aa11.02□□□□□ -0.64
PROM1-215ENST00000513448 HSPD1P10809 573 aaKnown RBP11.02□□□□□ -0.64
PROM1-215ENST00000513448 Q6ZUG5 572 aa11.02□□□□□ -0.64
PROM1-215ENST00000513448 SMARCC2Q8TAQ2 1214 aa11.02□□□□□ -0.64
PROM1-215ENST00000513448 ZNF512BQ96KM6 892 aaPredicted RBP11.02□□□□□ -0.64
PROM1-215ENST00000513448 SEC62Q99442 399 aaKnown RBP11.02□□□□□ -0.64
PROM1-215ENST00000513448 TAF6LQ9Y6J9 622 aa11.02□□□□□ -0.64
PROM1-215ENST00000513448 ZNF500O60304 480 aaPredicted RBP11.02□□□□□ -0.65
PROM1-215ENST00000513448 EXOSC10Q01780 885 aaKnown RBP11.02□□□□□ -0.65
PROM1-215ENST00000513448 ATL3Q6DD88 541 aa11.02□□□□□ -0.65
PROM1-215ENST00000513448 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
PROM1-215ENST00000513448 BCL9O00512 1426 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
PROM1-215ENST00000513448 ERVV-1B6SEH8 477 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 FGD1P98174 961 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 TAF7LQ5H9L4 462 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 DNAJC10Q8IXB1 793 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 ZNF594Q96JF6 807 aaPredicted RBP11.01□□□□□ -0.65
PROM1-215ENST00000513448 AK7Q96M32 723 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 CFAP45Q9UL16 551 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 EVCP57679 992 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 NAA16Q6N069 864 aaPredicted RBP11.01□□□□□ -0.65
PROM1-215ENST00000513448 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 XAGE2Q96GT9 111 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 TCEANC2Q96MN5 208 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 FUCA2Q9BTY2 467 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 CDCA7Q9BWT1 371 aaPredicted RBP11.01□□□□□ -0.65
PROM1-215ENST00000513448 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
PROM1-215ENST00000513448 MAST3O60307 1309 aa11□□□□□ -0.65
PROM1-215ENST00000513448 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
PROM1-215ENST00000513448 TERF1P54274 439 aa11□□□□□ -0.65
PROM1-215ENST00000513448 TTC6Q86TZ1 520 aa11□□□□□ -0.65
PROM1-215ENST00000513448 RNF214Q8ND24 703 aa11□□□□□ -0.65
PROM1-215ENST00000513448 BRF1Q92994 677 aa11□□□□□ -0.65
PROM1-215ENST00000513448 PUS3Q9BZE2 481 aaKnown RBP11□□□□□ -0.65
PROM1-215ENST00000513448 DDX19AQ9NUU7 478 aaKnown RBP11□□□□□ -0.65
PROM1-215ENST00000513448 GOLGA6L4A6NEF3 574 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 E7EWF7 191 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 CCDC192P0DO97 292 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 IL6STP40189 918 aaPredicted RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 TTF1Q15361 905 aaPredicted RBP10.99□□□□□ -0.65
PROM1-215ENST00000513448 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 FAM89AQ96GI7 184 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 SPATA32Q96LK8 384 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.65
PROM1-215ENST00000513448 RIPOR2Q9Y4F9 1068 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 PLCH1Q4KWH8 1693 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 ITGB4P16144 1822 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 ANKRD18BA2A2Z9 1011 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 H3BQV1 296 aa10.99□□□□□ -0.65
PROM1-215ENST00000513448 EXOC5O00471 708 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms