RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 DTX1Q86Y01 620 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 SIX5Q8N196 739 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 BCANQ96GW7 911 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 PALM3A6NDB9 673 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 TGFB1P01137 390 aa6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 ZFATQ9P243 1243 aa6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 ATAD2Q6PL18 1390 aa6.67□□□□□ -1.34
PDLIM5-218ENST00000513341 ADGRL1O94910 1474 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 HECW2Q9P2P5 1572 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 ALX3O95076 343 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 INPP5BP32019 993 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 CLDN10P78369 228 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 STOML1Q9UBI4 398 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 TSPOAP1O95153 1857 aa6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
PDLIM5-218ENST00000513341 ADAMTS12P58397 1594 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 DHX15O43143 795 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 ADAMTS4O75173 837 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 DKK1O94907 266 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 JAG1P78504 1218 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 UVSSAQ2YD98 709 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 BCS1LQ9Y276 419 aa6.65□□□□□ -1.34
PDLIM5-218ENST00000513341 ERICH3Q5RHP9 1530 aa6.65□□□□□ -1.35
PDLIM5-218ENST00000513341 HOXD8P13378 290 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-218ENST00000513341 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-218ENST00000513341 DEPDC4Q8N2C3 294 aa6.64□□□□□ -1.35
PDLIM5-218ENST00000513341 IFT43Q96FT9 208 aa6.64□□□□□ -1.35
PDLIM5-218ENST00000513341 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
PDLIM5-218ENST00000513341 WNT11O96014 354 aa6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 EGFRP00533 1210 aa6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 NFIAQ12857 509 aa6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 SETDB1Q15047 1291 aa6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 TSEN2Q8NCE0 465 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 UBL7Q96S82 380 aaPredicted RBP6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 MUC3BQ9H195 1237 aa6.63□□□□□ -1.35
PDLIM5-218ENST00000513341 ADCY10Q96PN6 1610 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 GLI2P10070 1586 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 PRR19A6NJB7 356 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 GLB1P16278 677 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 TARSP26639 723 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 RNF43Q68DV7 783 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 OGFOD1Q8N543 542 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 TLR7Q9NYK1 1049 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-218ENST00000513341 PLB1Q6P1J6 1458 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 USP17L3A6NCW0 530 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 USP17L4A6NCW7 530 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 RARAP10276 462 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 IDH3AP50213 366 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 ARSDP51689 593 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 USP17L2Q6R6M4 530 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 USP17L1Q7RTZ2 530 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 ARMC10Q8N2F6 343 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 PLD4Q96BZ4 506 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 DBNDD2Q9BQY9 259 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 TOP2BQ02880 1626 aa6.61□□□□□ -1.35
PDLIM5-218ENST00000513341 MLLT1Q03111 559 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-218ENST00000513341 IL22RA1Q8N6P7 574 aa6.6□□□□□ -1.35
PDLIM5-218ENST00000513341 SCG3Q8WXD2 468 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-218ENST00000513341 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-218ENST00000513341 LOC102724428A0A0B4J2F2 783 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 EIF2AK2P19525 551 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 SOX18P35713 384 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 SIK1P57059 783 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 MCM6Q14566 821 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 NGLY1Q96IV0 654 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 COG6Q9Y2V7 657 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 KIAA0586Q9BVV6 1533 aa6.59□□□□□ -1.35
PDLIM5-218ENST00000513341 LMTK3Q96Q04 1460 aa6.59□□□□□ -1.36
PDLIM5-218ENST00000513341 PTPRGP23470 1445 aa6.59□□□□□ -1.36
PDLIM5-218ENST00000513341 ATP9BO43861 1147 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 SASH3O75995 380 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 KRT25Q7Z3Z0 450 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 POU5F2Q8N7G0 328 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 C7orf69Q9H7B7 122 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 MKRN1Q9UHC7 482 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 TEX14Q8IWB6 1497 aa6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 PPRC1Q5VV67 1664 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-218ENST00000513341 RUSC2Q8N2Y8 1516 aa6.57□□□□□ -1.36
PDLIM5-218ENST00000513341 ABCC2Q92887 1545 aa6.57□□□□□ -1.36
PDLIM5-218ENST00000513341 IGFBP4P22692 258 aa6.57□□□□□ -1.36
PDLIM5-218ENST00000513341 ASXL2Q76L83 1435 aa6.57□□□□□ -1.36
PDLIM5-218ENST00000513341 GHRHP01286 108 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 SEC13P55735 322 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 HFE2Q6ZVN8 426 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 CLEC10AQ8IUN9 316 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 MYRFLQ96LU7 910 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 RBSNQ9H1K0 784 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 PPME1Q9Y570 386 aa6.56□□□□□ -1.36
PDLIM5-218ENST00000513341 UHRF1BP1LA0JNW5 1464 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 BIVM-ERCC5R4GMW8 1640 aa6.55□□□□□ -1.36
PDLIM5-218ENST00000513341 TM4SF5O14894 197 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms