RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 RTL9Q8NET4 1388 aa9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 H0YIN7 160 aa9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 CTSWP56202 376 aa9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 SF3B3Q15393 1217 aaKnown RBP9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 SUCLG2Q96I99 432 aa9.51□□□□□ -0.89
HMGXB3-204ENST00000513318 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 GNAI2P04899 355 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 SRGNP10124 158 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 NPR1P16066 1061 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 FOXO4P98177 505 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 CCDC152Q4G0S7 254 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 MASTLQ96GX5 879 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 LRRFIP2Q9Y608 721 aaKnown RBP9.5□□□□□ -0.89
HMGXB3-204ENST00000513318 ARAP2Q8WZ64 1704 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 CSF1RP07333 972 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 DPEP1P16444 411 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 CHRNA5P30532 468 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 HOXA10P31260 410 aaPredicted RBP9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 STYK1Q6J9G0 422 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 C3orf67Q6ZVT6 689 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 TTLL11Q8NHH1 800 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 SYT17Q9BSW7 474 aa9.49□□□□□ -0.89
HMGXB3-204ENST00000513318 PSME4Q14997 1843 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 MTX1Q13505 466 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 AAMPQ13685 434 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 FAM161AQ3B820 660 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 EPHA10Q5JZY3 1008 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 LMBR1LQ6UX01 489 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 DDX46Q7L014 1031 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 ANKRD44Q8N8A2 993 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 ZNF622Q969S3 477 aaKnown RBP eCLIP9.48□□□□□ -0.893e-7■■■□□ 15.5
HMGXB3-204ENST00000513318 RBM17Q96I25 401 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 CRBNQ96SW2 442 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 CDC5LQ99459 802 aaKnown RBP9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
HMGXB3-204ENST00000513318 A0A0G2JLW4 131 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 KCNA3P22001 575 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 ITGA6P23229 1130 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 IFIT5Q13325 482 aaKnown RBP9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 GRAPQ13588 217 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 CCDC57Q2TAC2 916 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 GRAPLQ8TC17 118 aaPredicted RBP9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 GREM2Q9H772 168 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 PIM2Q9P1W9 311 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 SRCAPQ6ZRS2 3230 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 TIAM2Q8IVF5 1701 aa9.47□□□□□ -0.89
HMGXB3-204ENST00000513318 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
HMGXB3-204ENST00000513318 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-204ENST00000513318 TMC4Q7Z404 712 aa9.46□□□□□ -0.9
HMGXB3-204ENST00000513318 TTLL6Q8N841 843 aa9.46□□□□□ -0.9
HMGXB3-204ENST00000513318 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
HMGXB3-204ENST00000513318 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 SRGAP3O43295 1099 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 BBOX1O75936 387 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 NEFLP07196 543 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 IGHMBP2P38935 993 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 RPS8P62241 208 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 ANKRD18AQ8IVF6 992 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 BBXQ8WY36 941 aaPredicted RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 CELF1Q92879 486 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 DUOX1Q9NRD9 1551 aa9.45□□□□□ -0.9
HMGXB3-204ENST00000513318 GOLGB1Q14789 3259 aaKnown RBP9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 IER5LQ5T953 404 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 RPAP2Q8IXW5 612 aaPredicted RBP9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 EXOC6Q8TAG9 804 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 SNED1Q8TER0 1413 aa9.44□□□□□ -0.9
HMGXB3-204ENST00000513318 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 HMMRO75330 724 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 RFX5P48382 616 aaPredicted RBP9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 PTPN12Q05209 780 aaKnown RBP9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 GRIPAP1Q4V328 841 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 SLC39A7Q92504 469 aa9.43□□□□□ -0.9
HMGXB3-204ENST00000513318 MFRPQ9BY79 579 aa9.43□□□□□ -0.9
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